DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18558 and C1galt1c1

DIOPT Version :10

Sequence 1:NP_608720.2 Gene:CG18558 / 33482 FlyBaseID:FBgn0031469 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_067525.1 Gene:C1galt1c1 / 59048 MGIID:1913493 Length:316 Species:Mus musculus


Alignment Length:300 Identity:80/300 - (26%)
Similarity:139/300 - (46%) Gaps:51/300 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 LRSPNPLTKIASRPLNDQLAKM-------MYRSVRIICLVLTWPKKYMSGARAISETWGRHCNRV 351
            |::||          .|.::|:       :.:|.|:.|:||..||.....| |:.|||.:||::.
Mouse    42 LQAPN----------KDDISKISEAERMELSKSFRVYCIVLVKPKDVSLWA-AVKETWTKHCDKA 95

  Fly   352 IYYGSFPGTTISGLEIVGLNASDTRSKLWGKTKAAFRHAYRNYGHEVDWFYKADDDTYAVMENMR 416
            .::.|   ..:...|.:.::.:|    :|...:.|:::||..|..:.:||:.|...|:||:||::
Mouse    96 EFFSS---ENVKVFESINMDTND----MWLMMRKAYKYAYDQYRDQYNWFFLARPTTFAVIENLK 153

  Fly   417 KLLKPYSPSNPIYFGSPFKLGSTLYMSGGAGYVLSKSAVELLN--LGAAENCQPGDQG------T 473
            ..|.....|.|.|.|...|.|...|:|...|.|||..:::.||  |...|.|.  :||      :
Mouse   154 YFLLKKDQSQPFYLGHTVKSGDLEYVSVDGGIVLSIESMKRLNSLLSVPEKCP--EQGGMIWKIS 216

  Fly   474 EDYVMGKCLSLLQVQAGDSRDLLGRQRFFSLSLEHFLIPNRDDEGFWLQEYLYQTTGTGLE-CCS 537
            ||..:..||....|.|.::.|..|:..|           |....|.:::|.:.......:| |||
Mouse   217 EDKQLAVCLKYAGVFAENAEDADGKDVF-----------NTKSVGLFIKEAMTNQPNQVVEGCCS 270

  Fly   538 TYSISIHNVSPYEMHFLETILYKRRPYGLLAGHA----PP 573
            ..:::.:.::|.:||.:...:|:.|.:|.:...|    ||
Mouse   271 DMAVTFNGLTPNQMHVMMYGVYRLRAFGHVFNDALVFLPP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18558NP_608720.2 Galactosyl_T <400..>458 CDD:473923 21/57 (37%)
C1galt1c1NP_067525.1 None

Return to query results.
Submit another query.