DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18558 and C1galt1c1

DIOPT Version :10

Sequence 1:NP_608720.2 Gene:CG18558 / 33482 FlyBaseID:FBgn0031469 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001025204.1 Gene:C1galt1c1 / 302499 RGDID:1311230 Length:316 Species:Rattus norvegicus


Alignment Length:305 Identity:82/305 - (26%)
Similarity:140/305 - (45%) Gaps:61/305 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 LRSPNPLTKIASRPLNDQLAKM-------MYRSVRIICLVLTWPKKYMSGARAISETWGRHCNRV 351
            |::||          .|.:.|:       :.:|.::.|:||..||.....| |:.|||.:||::.
  Rat    42 LQAPN----------KDDILKISETERMELSKSFQVYCIVLVKPKDVSLWA-AVKETWTKHCDKA 95

  Fly   352 IYYGSFPGTTISGLEIVGLNASDTRSKLWGKTKAAFRHAYRNYGHEVDWFYKADDDTYAVMENMR 416
            .::.|   ..:...|.:.::.:|    :|...:.|:::||..|..:.:||:.|...|:||:||::
  Rat    96 EFFSS---ENVKVFESINMDTND----MWLMMRKAYKYAYDKYKDQYNWFFLARPTTFAVIENLK 153

  Fly   417 KLLKPYSPSNPIYFGSPFKLGSTLYMSGGAGYVLSKSAVELLN--LGAAENCQPGDQG------T 473
            ..|....||.|.|.|...|.|...|:|...|.|||..:::.||  |...|.|.  :||      :
  Rat   154 YFLLRKDPSQPFYLGHTVKSGDLEYVSVDGGIVLSIESMKRLNGLLSVPEKCP--EQGGMIWKIS 216

  Fly   474 EDYVMGKCLSLLQVQAGDSRDLLGRQRFFSLSLEHFL------IPNRDDEGFWLQEYLYQTTGTG 532
            ||..:..||....|.|.::.|..|:..|.:.|:..|:      .||:..||              
  Rat   217 EDKQLAVCLKYAGVFAENAEDADGKDVFNTKSVGLFIKEAMTNQPNQVVEG-------------- 267

  Fly   533 LECCSTYSISIHNVSPYEMHFLETILYKRRPYGLLAGHA----PP 573
              |||..:::.:.::|.:||.:...:|:.|.:|.:...|    ||
  Rat   268 --CCSDMAVTFNGLTPNQMHVMMYGVYRLRAFGHVFNDALVFLPP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18558NP_608720.2 Galactosyl_T <400..>458 CDD:473923 22/57 (39%)
C1galt1c1NP_001025204.1 None

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