DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2975 and AT4G23490

DIOPT Version :9

Sequence 1:NP_608719.1 Gene:CG2975 / 33481 FlyBaseID:FBgn0031468 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_567683.1 Gene:AT4G23490 / 828447 AraportID:AT4G23490 Length:526 Species:Arabidopsis thaliana


Alignment Length:468 Identity:98/468 - (20%)
Similarity:166/468 - (35%) Gaps:116/468 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RPNRKRLELMLMLLIGLAWGILLSELMKRTRWQNHADRLKEESSPFP-----SSQRSRNLRTPPT 63
            ||..| |.:.|:..|...:.|.:.:|:.       ..|..::|:.|.     |:..|.|:.:..|
plant    31 RPGPK-LMVWLICFIVFTYIIYMLKLVS-------TSRSCDDSTSFTTVSALSTNVSSNVSSLST 87

  Fly    64 -IAPSTTN---PPPDILAARLFNETRVLCMVLTSPKTHHTRAIHIKRTW--GRRCNKLIFMSTKA 122
             :|....|   ...|.:..:|.:...|:..:..|.|....|..:|| .|  .:|....:::..:.
plant    88 SLASRRRNWEEEEEDTVVDKLTDLNHVVFGIAASSKLWKQRKEYIK-IWYKPKRMRGYVWLDKEV 151

  Fly   123 DKELGSVALNVREGYSNLWPKTR-----AALQYVYKHHF------------------QKYDWFLK 164
            .|.|..      :....|.|..:     |:..|..|...                  :...||:.
plant   152 KKSLSD------DDDEKLLPPVKISGGTASFPYTNKQGQRSALRISRIVSETLRLGPKNVRWFVM 210

  Fly   165 ADDDTYFIMENLRAFLHAHNFREPVYFGNKFRQHVKEGYMS-----GGAGYVLSKMALHRLIKLG 224
            .||||.|:::||...|..::..:..|.|:....|::..:.|     ||.|:.:|......|.|: 
plant   211 GDDDTVFVIDNLIRVLRKYDHEQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALSKM- 274

  Fly   225 FSNSSICTNRN---YGYEDVELGRCLAGVGV-----VGGDSRDEQG-------LSRFIPFSPLHW 274
               ...|..|.   ||.:| .:..|:|.:||     :|....|..|       .....||..:|.
plant   275 ---QDRCIQRYPALYGSDD-RMQACMAELGVPLTKELGFHQYDVYGNLFGLLAAHPVTPFVSMHH 335

  Fly   275 YPQPPDWYQP----------LLYYTSPDNSSDCCSNTAISFHYNNAQEFYVLEYIIYKLRIF-GI 328
            .    |..:|          |...|.| ...|.......|..|:..:.:.:.....|.::|| ||
plant   336 L----DVVEPIFPNMTRVRALKKITEP-MKLDSAGLLQQSICYDKHKSWTISVSWGYAVQIFRGI 395

  Fly   329 --NRELGPLPK-------KKA-------SSRPMSIN---------LQTTKEENGHIALIKMMPRK 368
              .||: .:|.       |:|       ::||:|.|         :.:||.:......:......
plant   396 FSPREM-EMPSRTFLNWYKRADYTAYAFNTRPVSRNPCQKPFVFYMSSTKFDQQLNTTVSEYTIH 459

  Fly   369 NVTTPNYRTKTTS 381
            .|:.|:.|.|.|:
plant   460 RVSHPSCRWKMTN 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2975NP_608719.1 Galactosyl_T 90..>214 CDD:304462 31/153 (20%)
AT4G23490NP_567683.1 Galactosyl_T 109..311 CDD:304462 45/213 (21%)
DUF604 246..499 CDD:282497 51/238 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.