DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3119 and Rfng

DIOPT Version :10

Sequence 1:NP_608717.2 Gene:CG3119 / 33479 FlyBaseID:FBgn0031466 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_033079.1 Gene:Rfng / 19719 MGIID:894275 Length:332 Species:Mus musculus


Alignment Length:205 Identity:50/205 - (24%)
Similarity:75/205 - (36%) Gaps:45/205 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VLAFVLLLYV---YDVSRVTPCWSSTSTMTTATTARIEDGPPPRILCMVLTCPENVQSLARSVYE 83
            |||.:|||.:   ..:.| .|........|.:.|...:...|..:...|.|..:|.....|.:..
Mouse    18 VLAVLLLLPLPLPLPLPR-APAPDPDRVPTRSLTLEGDRLQPDDVFIAVKTTRKNHGPRLRLLLR 81

  Fly    84 TWGQRCSR--LIFASSEDYEPLGVVGVVEPTGGGYEDLWN----KTREGFRHVWEHYAGDYD--- 139
            ||..|..|  .||...:|.|       ::...||.....|    :||:.   :....:.:||   
Mouse    82 TWISRAPRQTFIFTDGDDPE-------LQMLAGGRMINTNCSAVRTRQA---LCCKMSVEYDKFL 136

  Fly   140 -----WFLKADDDTYVVMENLQHLLRGFDPNTPVFFGYKMSRYNVS-----------------YM 182
                 ||...|||.||..::|.|||..|..|..::.|.....:.:.                 :.
Mouse   137 ESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIEATERVQGGGTSNTVKFWFA 201

  Fly   183 SGGASYILSR 192
            :|||.:.|||
Mouse   202 TGGAGFCLSR 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3119NP_608717.2 Galactosyl_T 86..235 CDD:473923 33/138 (24%)
RfngNP_033079.1 Fringe 56..306 CDD:367085 40/166 (24%)

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