DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3123 and CG9988

DIOPT Version :10

Sequence 1:NP_608716.1 Gene:CG3123 / 33478 FlyBaseID:FBgn0031465 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_651625.1 Gene:CG9988 / 43388 FlyBaseID:FBgn0039591 Length:668 Species:Drosophila melanogaster


Alignment Length:659 Identity:179/659 - (27%)
Similarity:297/659 - (45%) Gaps:85/659 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LTSLSDRNKTISIREVPQIYINEEDEL----FVNTTGCRISATKPLSLYALSFMEPIEPVLCRME 84
            :|...|.|..|...|..:   |.:|.:    ||.:..|:|....|.:..|::...|.....|..|
  Fly    39 VTGSDDTNSDIPPAEEDR---NVQDVVRPAYFVESAKCKIPYVDPFASDAMAIFHPEHFETCSNE 100

  Fly    85 QLMVA---ETIGDRNYLVRNISRHGIL---SWRQVSCIYREFVRVDDAHNKY--ISLKFFKLTDR 141
            ..:|.   :....|..|..|.|...|:   :..:.:|.|:|..| |..|:.|  :..|:|     
  Fly   101 TALVTPIYDISRQRYVLFINESLASIILNSNGGEYNCYYQEITR-DRKHDSYDKMERKYF----- 159

  Fly   142 TRYLEVGTGLQHIRTWCW-----VDFGRIIFHDVMYFLPPLPQATNRSTEHQKRKLSVMILGVDS 201
            ::..||...::.:...|.     .|..:...::::.:.|| |:..  |.:..|||.||::.|:||
  Fly   160 SQNYEVPLHVEGLILTCHRLGNESDILQSDAYNLIQYRPP-PKGL--SLKPSKRKPSVLMFGIDS 221

  Fly   202 ISHMHYMRYFHRVADFIEHLPHTEFWGYNRVALNTYPNLIPLVSGLS-VSEMEASC-YHDELNFD 264
            :|.::..|...:|..|:......|..|||::..||:|||:.:::|.: .|.::..| :|::...|
  Fly   222 LSRINLRRTMPKVYKFLTRDGWFEQQGYNKIGDNTFPNLLAILTGYNPESAIKKVCNWHEDGCLD 286

  Fly   265 KCNFLWNEFKRAGYSTIFAEDTDTAGLFIYRKRGFQKQPTDIYMRPLMTEIES--HSLYRTTFDL 327
            :..|:|:.|:.|.|.|.:|||......|.|.|.||.:||||.|:|||...|||  ::...:...:
  Fly   287 RTPFIWHYFRNASYLTAYAEDEAGINTFNYWKPGFLEQPTDFYLRPLQKAIESGLNTWKCSDCSM 351

  Fly   328 K-CTGHRLYGEFYYD----FVSKLIPHMERQLFFSFLWNMHGIHDVFPYAKFVDKDYLSILTRLH 387
            | |.|.|:...:.||    |.::.:.  ||.::..| |:....||.|.....::...|..|....
  Fly   352 KYCIGRRITSSYAYDMARNFANRFVD--ERPIWGLF-WSNSFSHDSFQMPSKMEDYVLQYLLDFE 413

  Fly   388 EKGVMENTLILFMGDHGLRFDKFARTAPGQHEMSQPLLIAIYPEWLKRRFPLAMSNFERNARSLI 452
            ..||.:.::::|:.|||.|:.:......|..|...|.:....|.|.:.::|......|.|...|.
  Fly   414 ADGVFDQSIMVFLSDHGSRYGRLMSLPSGFLEERLPSMFIYLPPWFRAQYPEYARALELNRNRLT 478

  Fly   453 TTFDLHETLKDVIHLDRLTDANVRNRTLYLTNE--RGISLFLPIPQNRNCKTAEIKQHYCLCNEL 515
            :.:|||.|||.:|.|....|    .:||....:  :..|||.|:.:.|:|:.|.|.:|:|.|...
  Fly   479 SNYDLHNTLKHIIELGGTPD----GQTLPKAADCPKCQSLFYPVDETRSCEDAGIPEHFCTCVPY 539

  Fly   516 KSVSTHESAIQEAASFA---VDRINELI---KPYPQCRVLSLQSVRTAY--------------RA 560
            |.:.|     |.|.|.|   :.||||.:   .....|..|:|..:....              ||
  Fly   540 KRLDT-----QWAKSIAPKVIGRINEYLAGRNLSKICSELTLSYIHLTEMKVELDQNFHDDVPRA 599

  Fly   561 KSSTYRGNYRVSQVMVRLKTTPGDGNFDATVLITMLNGEKTDMKLGGP-VTRTDRYAHQAYCVQN 624
            :..|||..::|.|         ...:|.|||:   .|.....:::..| ::|.|.|.:.:.||::
  Fly   600 ELGTYRTMFKVKQ---------NSADFRATVI---FNNVTDSVEVEVPTISRLDSYENVSTCVKD 652

  Fly   625 YRIEMYCYC 633
            ...:|||.|
  Fly   653 KTDKMYCIC 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3123NP_608716.1 DUF229 74..555 CDD:397236 144/510 (28%)
CG9988NP_651625.1 DUF229 90..580 CDD:397236 144/510 (28%)

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