DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Duox and Cybb

DIOPT Version :9

Sequence 1:NP_001259968.1 Gene:Duox / 33477 FlyBaseID:FBgn0283531 Length:1537 Species:Drosophila melanogaster
Sequence 2:NP_076455.1 Gene:Cybb / 66021 RGDID:620574 Length:570 Species:Rattus norvegicus


Alignment Length:584 Identity:155/584 - (26%)
Similarity:265/584 - (45%) Gaps:100/584 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1029 NIFYLFLFYVVTIVLFVERFIHYSFMAEHTDLRHIMGVGIAITRGSAASLSFCYSLLLLTMSRNL 1093
            :||.:.::..:.:.|||:.:..|....::...|.::|..:|:.|..||.|:|...|:||.:.|||
  Rat    11 SIFVILVWLGLNVFLFVKYYKVYDDEPKYNYTRKLLGSALALARAPAACLNFNCMLILLPVCRNL 75

  Fly  1094 ITKLK------EFPIQQYIPLDSHIQFHKIAACTALFFSVLHTVGHIVNF-------------YH 1139
            ::.|:      ...|::  .||.::.|||:.|......:.:||:.|:.|.             |.
  Rat    76 LSFLRGSSACCSTRIRR--QLDRNLTFHKMVAWMIALHTAIHTIAHLFNVEWCVNARVGTSDPYS 138

  Fly  1140 VSTQS---HENLRCLTREVHFASDYKPDITFWLFQTVT---GTTGVMLFIIMCIIFVFAHPTIRK 1198
            |:..:   .||...|    :||.:...:....|:..||   |.||:::.:.:.:|...:..|||:
  Rat   139 VALSNIGDKENEEYL----NFAREKIKNPEGGLYVAVTRLAGITGIVITLCLILIITSSTKTIRR 199

  Fly  1199 KAYNFFWNMHTLYIGLYLLSLIHGLARLT------------------------------------ 1227
            ..:..||..|.|::..::...|||..|:.                                    
  Rat   200 SYFEVFWYTHHLFVIFFIGLAIHGAERIVRGQTSDSLKEHNLDVCADKIKEWGKIKECPVPKFAG 264

  Fly  1228 GPPRFWMFFLGPGIVYTLDKIVSLRTKYMALDVIDTDLLPSDVIKIKFYRPPNLKYLSGQWVRLS 1292
            .||..|.:.:||..:|..:::|........:.:......|...|:::. :....:...||::.:.
  Rat   265 NPPMTWKWIVGPMFLYLCERLVRFWRSQQKVVITKVVTHPFKTIELQM-KKKGFRMEVGQYIFVK 328

  Fly  1293 CTAFRPHEMHSFTLTSAPHENFLSCHIKAQGPWTWKLRNYFDPCNYNPED------QPKIRIEGP 1351
            ..|....|.|.|||||||.|:|.|.||:..|.||   ...|..|..:.::      .|||.::||
  Rat   329 RPAVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWT---EGLFKACGCDKQEFQDAWKLPKIAVDGP 390

  Fly  1352 FGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVACKKVYFLWICPSHKHFEWF 1416
            ||..::|.:.:||.::||.||||||.||||..:.:....|..| :..||:||.|:|.....||||
  Rat   391 FGTASEDVFSYEVVMLVGAGIGVTPSASILKSVWYKYCDNATS-LRLKKIYFYWLCRDTHAFEWF 454

  Fly  1417 IDVLR----DVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHF--QRLSKTSIFTGLKAVN 1475
            .|:|:    .:::::..|.|..:|::|.:...          ..|||  ....:..:.||||...
  Rat   455 ADLLQLLETQMQERNNANFLSYNIYLTGWDES----------QANHFAVHHDEEKDVITGLKQKT 509

  Fly  1476 HFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLP---YFIHHFENF 1536
            .:|||:..:..|.:..:|.. ::||||.|||..|.|::..  ..::.:...|   :||.:.|||
  Rat   510 LYGRPNWDNEFKTIASQHPN-TRIGVFLCGPEALAKTLSK--QSISNSESGPRGVHFIFNKENF 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DuoxNP_001259968.1 An_peroxidase 70..580 CDD:281139
dual_peroxidase_like 72..625 CDD:188652
EFh 827..882 CDD:238008
EFh 860..921 CDD:238008
EF-hand_7 860..920 CDD:290234
EFh 895..966 CDD:238008
EF-hand_7 899..965 CDD:290234
Ferric_reduct 1084..1217 CDD:280043 39/157 (25%)
NOX_Duox_like_FAD_NADP 1265..1536 CDD:99783 89/285 (31%)
CybbNP_076455.1 Ferric_reduct 65..219 CDD:280043 39/159 (25%)
NOX_Duox_like_FAD_NADP 297..570 CDD:99783 89/290 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000155
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100242
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X184
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

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