DRSC/TRiP Functional Genomics Resources

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Protein Alignment Duox and cybb

DIOPT Version :9

Sequence 1:NP_001259968.1 Gene:Duox / 33477 FlyBaseID:FBgn0283531 Length:1537 Species:Drosophila melanogaster
Sequence 2:NP_956708.1 Gene:cybb / 393386 ZFINID:ZDB-GENE-040426-1380 Length:565 Species:Danio rerio


Alignment Length:579 Identity:154/579 - (26%)
Similarity:271/579 - (46%) Gaps:95/579 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1029 NIFYLFLFYVVTIVLFVERFIHYSFMAE-HTDLRHIMGVGIAITRGSAASLSFCYSLLLLTMSRN 1092
            ::|.:.::..:.:.|||  :.:.:|:.: :...|.|:|..::..|..||.|:|...|:||.:.||
Zfish    11 SVFVILVWLGINVFLFV--YFYLAFLIDKYYYTRVILGHALSWARAPAACLNFNCMLILLPVCRN 73

  Fly  1093 LITKLK-------EFPIQQYIPLDSHIQFHKIAACTALFFSVLHTVGHIVNF------------- 1137
            |::.|:       ....:|   ||.:|.|||:.|....|.:.:|.:.|:.||             
Zfish    74 LLSFLRGSIQCCSRTAARQ---LDRNITFHKLVAYMIAFHTAVHIIAHLFNFERFMDSQLMINSS 135

  Fly  1138 ---YHVSTQSHENLRCLTREVHFASDYKPDITFWLFQTVTGTTGVMLFIIMCIIFVFAHPTIRKK 1199
               |.:|...:.:.|.....:. ::|..|.|.  :|.||.|.|||::.:.:.:|...:...||:.
Zfish   136 HLPYVLSQIGNNDNRSYLNPIR-SNDTNPTIV--MFTTVAGLTGVVITLALILIITSSMEVIRRS 197

  Fly  1200 AYNFFWNMHTLYIGLYLLSLIHGLARLT------------------------------------- 1227
            .:..||..|.|:|..::..::||:.|:.                                     
Zfish   198 YFEVFWFTHHLFIVFFIGLVLHGIGRIVRGQTDADLQVHDPTICHSKFEKWGQNVTDCPVPIFAG 262

  Fly  1228 GPPRFWMFFLGPGIVYTLDKIVSLRTKYMALDVIDTDLLPSDVIKIKFYRPPNLKYLSGQWVRLS 1292
            .||:.|.:.:||..:|..:::|........:.:......||..::::. :....|...||::.:.
Zfish   263 NPPKTWKWVVGPMFLYVCERLVRFYRSQQKVVITKVVTHPSKTLELQM-KKKGFKMEVGQYIFMM 326

  Fly  1293 CTAFRPHEMHSFTLTSAPHENFLSCHIKAQGPWTWKLRNYFDPCN------YNPEDQPKIRIEGP 1351
            |.:....|.|.|||||||.|:..|.||:..|.||..|   :..|.      .:....||:.::||
Zfish   327 CPSISQLEWHPFTLTSAPEEDHFSVHIRIVGDWTQAL---YSACGGDKTAVLDAWTLPKMAVDGP 388

  Fly  1352 FGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVACKKVYFLWICPSHKHFEWF 1416
            ||..::|.:::|..::||.||||||:||:|.. |:.........|..||:||.|:||..:.||||
Zfish   389 FGTASEDVFRYEAVMLVGAGIGVTPFASVLKS-VWYKHVQENQNVFTKKIYFYWLCPETQAFEWF 452

  Fly  1417 IDVLRDVEK----KDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKTSIFTGLKAVNHF 1477
            .|:|:.:||    |::::.|..:|::|::   .|.....|.:     |..::....||||....:
Zfish   453 ADLLQSLEKQMSDKNMSDFLSYNIYLTRW---KDAEAAHLRV-----QYEAEDDPITGLKQKTRY 509

  Fly  1478 GRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLPYFIHHFENF 1536
            |:|:..:....:..:|. .:|:|||.|||..|.|::...|  ::.|.....||.:.|||
Zfish   510 GKPNWDNEFSLIASQHP-GTKVGVFLCGPTALGKALSKQC--LSHTEGGTEFIFNKENF 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DuoxNP_001259968.1 An_peroxidase 70..580 CDD:281139
dual_peroxidase_like 72..625 CDD:188652
EFh 827..882 CDD:238008
EFh 860..921 CDD:238008
EF-hand_7 860..920 CDD:290234
EFh 895..966 CDD:238008
EF-hand_7 899..965 CDD:290234
Ferric_reduct 1084..1217 CDD:280043 41/155 (26%)
NOX_Duox_like_FAD_NADP 1265..1536 CDD:99783 88/280 (31%)
cybbNP_956708.1 Ferric_reduct 56..216 CDD:280043 45/165 (27%)
NOX_Duox_like_FAD_NADP 295..565 CDD:99783 88/285 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000155
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100242
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X184
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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