DRSC/TRiP Functional Genomics Resources

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Protein Alignment Duox and skpo-2

DIOPT Version :9

Sequence 1:NP_001259968.1 Gene:Duox / 33477 FlyBaseID:FBgn0283531 Length:1537 Species:Drosophila melanogaster
Sequence 2:NP_494540.1 Gene:skpo-2 / 173686 WormBaseID:WBGene00015841 Length:729 Species:Caenorhabditis elegans


Alignment Length:561 Identity:168/561 - (29%)
Similarity:258/561 - (45%) Gaps:113/561 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 CYEKMYSQTEKQRYDGWYNNLAHPDWGSVDSHLVRKAPPSYSDGVYAMAGA---NRPSTRRLSRL 120
            ||...|     :.:||..|||..|..||..:.|:|...|.|.:|:.|...:   :|||.|..|||
 Worm   199 CYHLRY-----RSFDGTCNNLKKPMIGSAFTALMRLKNPMYDNGLNAPTSSFLRSRPSARDASRL 258

  Fly   121 FMRGKDGLGSKFNRTALLAFFGQLVANEI---VMASESGCPI------EMHRIEIEKCDEMYDR- 175
            .:.....:  :.:..|||..:||.:|:::   .|.:...|..      ....:.:.:.|..:.| 
 Worm   259 LLSSSTQI--QHHSNALLMQWGQFIAHDLSKTTMLNNQECAACTSNKGRCTSVFLSRSDPTFGRF 321

  Fly   176 ECRGDKYIPFHRAAYDRDTGQSPNAPREQINQMTAWIDGSFIYSTSEAWLNAMRSFHNGTLLTEK 240
            .|     :|..|:.....||.|..  |||.|:.||:||||.||.:|:   .....|..|..|..|
 Worm   322 MC-----LPVARSTPVCGTGVSNF--REQFNENTAFIDGSMIYGSSD---RDQFLFRQGAFLKTK 376

  Fly   241 DGKLPVRNTMRVPLFNNPV-PSVMKMLSPERLFLLGDPRTNQNPAILSFAILFLRWHNTLAQRIK 304
                         |.||.| |.|.|    ....:.||.|.|....:.|..:|:||.||.:|..::
 Worm   377 -------------LINNRVFPPVDK----NNNVVAGDDRANIFVGLASLHVLYLRQHNRIAATLQ 424

  Fly   305 RVHPDWSDEDIYQRARHTVIASLQNVIVYEYLPAFLGTS----LPPYEGYKQDIHPGIGHIFQAA 365
            ||:|.|..|.::..:|..|.|.:|.:...||||..||.:    :..|.||..:|.|.:.:.|.:.
 Worm   425 RVNPHWDQERVFHESRKIVGAMIQRITFTEYLPKVLGVAFEERIGAYPGYDPNIDPSVANEFTSC 489

  Fly   366 AFRFGHTMIPP-------------GIYRRDGQCNFKETPM---GY-PAVRLCSTWWDSSGFFADT 413
            ||||||.||..             ||...||.  ||.|.:   |. |.:|               
 Worm   490 AFRFGHGMIQEFYPFLNEKFQHVGGIPFNDGM--FKSTHILNNGIDPLIR--------------- 537

  Fly   414 SVEEVLMGLASQISEREDPVLCSDVRDKLFGPMEFTRRDLGALNIMRGRDNGLPDYNTARESYGL 478
                .||.|.:::.:|..|.    |.:::||     ..|||::||.||||:|:|.|...|:..||
 Worm   538 ----GLMTLPAKMPQRLTPA----VTERIFG-----NSDLGSINIQRGRDHGVPPYTVWRKFCGL 589

  Fly   479 KRHKTWTDINPPLFETQPELLDMLKEAYDNKLDDVDVYVGGMLESYGQP------GEFFTAVIKE 537
            ...|.:..:...:  :...::|.||..|.: :|.:|:|||.:||   .|      |...:.:|.|
 Worm   590 PEVKDFEGLKQVI--SNQVVIDNLKVVYKH-VDAIDMYVGSLLE---DPVKDALVGPTLSCIIGE 648

  Fly   538 QFQRLRDADRFWFENERNGIFTPEEIAELRKITLWDIIVNS 578
            ||:|.|:.||.|:||.:  :|:||::.:::|||:..::.::
 Worm   649 QFKRTRNGDRLWYENSK--VFSPEQLLQIKKITMSRVLCDA 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DuoxNP_001259968.1 An_peroxidase 70..580 CDD:281139 165/550 (30%)
dual_peroxidase_like 72..625 CDD:188652 165/548 (30%)
EFh 827..882 CDD:238008
EFh 860..921 CDD:238008
EF-hand_7 860..920 CDD:290234
EFh 895..966 CDD:238008
EF-hand_7 899..965 CDD:290234
Ferric_reduct 1084..1217 CDD:280043
NOX_Duox_like_FAD_NADP 1265..1536 CDD:99783
skpo-2NP_494540.1 ShKT 61..95 CDD:214586
ShKT 101..135 CDD:214586
An_peroxidase 204..690 CDD:281139 166/556 (30%)
peroxinectin_like 341..687 CDD:188655 128/403 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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