DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and GDF5

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_000548.2 Gene:GDF5 / 8200 HGNCID:4220 Length:501 Species:Homo sapiens


Alignment Length:485 Identity:103/485 - (21%)
Similarity:180/485 - (37%) Gaps:123/485 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 HLMEQEEKAHRHVSPPVELPIMYGDAPEESSLSSDDHFDDLSPLDFVRNELMAEDQQNQEKDLDL 196
            |..:..:...|.|:|..:||  .|.||.::.         ..|..|:                  
Human   110 HPPQTRQATARTVTPKGQLP--GGKAPPKAG---------SVPSSFL------------------ 145

  Fly   197 DLDLDQQPETPIEPELPLGERNIT-----ISVKSSAGGCPKCESNRQVEHITEEQLTHLRIEFV- 255
             |...::|..|.||:.|.....||     :|:..:.....:...|..|:  .|..|.:....|: 
Human   146 -LKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVK--LEAGLANTITSFID 207

  Fly   256 -----------KQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKF 309
                       ||:.:..:...|...:...||      .:....|.|:.|........|      
Human   208 KGQDDRGPVVRKQRYVFDISALEKDGLLGAEL------RILRKKPSDTAKPAAPGGGRA------ 260

  Fly   310 ILLNREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLW-LFKNKQNRTDTASVNSTSAQ 373
                 .:::.:....|:...::.....:...|..|::|..  :| ||:|.:|          |||
Human   261 -----AQLKLSSCPSGRQPAALLDVRSVPGLDGSGWEVFD--IWKLFRNFKN----------SAQ 308

  Fly   374 QTIVVSEVEVDQQKDSKYLS---AAKTIAIQSV-NVQDEWMKIDIEWPIKHWISGHELSHLIQIT 434
            ..:.:...|..:..|.:.|.   ||:.:..::: .|.....|.|:            ..:.|:..
Human   309 LCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDL------------FFNEIKAR 361

  Fly   435 CGGCDVSDMEEIISVDKDYRPFIVIDMQNRRRK----SRQ-KR-SINCSSGMTECCREHLYISFR 493
            .|..|.:..|.:.|             |.|:|:    :|| || |.|..:   .|.|:.|:::|:
Human   362 SGQDDKTVYEYLFS-------------QRRKRRAPLATRQGKRPSKNLKA---RCSRKALHVNFK 410

  Fly   494 DIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVP--CCTAKQY 556
            |:||.:||:.|..|.|:.|.|.|..........::|:.|..::::...    |..|  ||...:.
Human   411 DMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDP----ESTPPTCCVPTRL 471

  Fly   557 SSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            |.:.::.:||:|....|...:|||||||||
Human   472 SPISILFIDSANNVVYKQYEDMVVESCGCR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 37/230 (16%)
TGF_beta 481..585 CDD:278448 32/105 (30%)
GDF5NP_000548.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..169 18/88 (20%)
TGFb_propeptide 145..344 CDD:279078 40/248 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..265 4/29 (14%)
TGFB 400..501 CDD:214556 33/104 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.