DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Tgfb1

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_067589.1 Gene:Tgfb1 / 59086 RGDID:69051 Length:390 Species:Rattus norvegicus


Alignment Length:401 Identity:99/401 - (24%)
Similarity:169/401 - (42%) Gaps:80/401 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 AGGCPKCESNRQVEHITEEQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDD 291
            |.|...|::      |..|.:...|||.::.|||.||||...|....|. |.|:.:.:...:  :
  Rat    27 AAGLSTCKT------IDMELVKRKRIEAIRGQILSKLRLASPPSQGEVP-PGPLPEAVLALY--N 82

  Fly   292 STKNKELD-----------DYYARTSKKFILLNREEVECNRARDGKSNPSMCF-TFKIDDADAEG 344
            ||:::...           ||||:...:.::::|.....::.:|...:..|.| |..|.:|..|.
  Rat    83 STRDRVAGESADPEPEPEADYYAKEVTRVLMVDRNNAIYDKTKDITHSIYMFFNTSDIREAVPEP 147

  Fly   345 FDVSTAVLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEVDQQKDS---KYLSAAKTIAIQSVNVQ 406
            ..:|.|.|.|.:.|                :.|...||:.|:..:   :||..    .:.:....
  Rat   148 PLLSRAELRLQRFK----------------STVEQHVELYQKYSNNSWRYLGN----RLLTPTDT 192

  Fly   407 DEWMKIDIEWPIKHW------ISGHELS---------HLIQITCGGCDVSDMEEIISVDKDYRPF 456
            .||:..|:...::.|      |.|...|         :::.:...|.......::.::....|||
  Rat   193 PEWLSFDVTGVVRQWLNQGDGIQGFRFSAHCSCDSKDNVLHVEINGISPKRRGDLGTIHDMNRPF 257

  Fly   457 IV-----IDMQNRRRKSRQKRSIN---C-SSGMTECCREHLYISFR-DIGWSNWILKPEGYNAYF 511
            ::     ::.......||.:|:::   | ||....||...|||.|| |:|| .||.:|:||:|.|
  Rat   258 LLLMATPLERAQHLHSSRHRRALDTNYCFSSTEKNCCVRQLYIDFRKDLGW-KWIHEPKGYHANF 321

  Fly   512 CRGSCSSVASVTQAASHHSSIMKILS--TSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKT 574
            |.|.|..:.|:.   :.:|.::.:.:  ..||:.|    |||..:....|.:|.. ......|:.
  Rat   322 CLGPCPYIWSLD---TQYSKVLALYNQHNPGASAS----PCCVPQALEPLPIVYY-VGRKPKVEQ 378

  Fly   575 LPNMVVESCGC 585
            |.||:|.||.|
  Rat   379 LSNMIVRSCKC 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 51/243 (21%)
TGF_beta 481..585 CDD:278448 37/106 (35%)
Tgfb1NP_067589.1 TGFb_propeptide 30..261 CDD:395559 53/259 (20%)
Straightjacket domain. /evidence=ECO:0000250|UniProtKB:P07200 30..74 17/50 (34%)
Arm domain. /evidence=ECO:0000250|UniProtKB:P07200 75..271 36/217 (17%)
Bowtie tail. /evidence=ECO:0000250|UniProtKB:P01137 226..252 1/25 (4%)
Cell attachment site. /evidence=ECO:0000255 244..246 0/1 (0%)
TGF_beta_TGFB1 292..390 CDD:381654 38/107 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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