DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and gdf6a

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001153466.2 Gene:gdf6a / 566470 ZFINID:ZDB-GENE-980526-373 Length:404 Species:Danio rerio


Alignment Length:382 Identity:85/382 - (22%)
Similarity:161/382 - (42%) Gaps:93/382 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   281 FDG---------MTLSHPDDSTKNKELD-----DYYARTSKKFILLNREEVECNRARDGKS-NPS 330
            |||         :..|.|..|.::...|     ||.....:.:....:..:..:..|..|| |..
Zfish    40 FDGQRSHKFLKEIFASSPGASRRDDFKDPVVPHDYMISIYRTYSAAEKLGLNASFFRSSKSANTI 104

  Fly   331 MCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEV------DQQKDS 389
            ..|..|..|      |::.:.|      :.:|....|::.|.::.:|.:|:.:      |.|...
Zfish   105 TSFVDKGKD------DLTLSPL------RRQTYLFDVSTLSDKEELVGAELRIFRKSPGDVQPSP 157

  Fly   390 K------YLS--AAKTIAIQSVNVQD----EWMKIDIEWPI-KHWISGHELSHLIQITCGGCDVS 441
            .      .||  :.:.:|.:|:::||    ||..:|: |.| ||....::|...:::|.|..|..
Zfish   158 SGVYNLHLLSCRSERPLASRSIDLQDSRKAEWEVLDV-WGIFKHRHQENQLCLQLKVTYGKSDTE 221

  Fly   442 -DMEEI----ISVDKDYRPFIVIDMQNRRR--------------------------KSRQKR--S 473
             |::::    .|..:..|..:|:..::::|                          |:|::|  :
Zfish   222 IDLKQLGFHRHSRTQQERAILVVYTRSKKRENLFNEMKEKIKSRGDDDEEESALQFKARRRRRTA 286

  Fly   474 INCSSG-------MTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSS 531
            :|...|       .:.|.::.|:::|:::||.:||:.|..|.||.|.|.|..........::|:.
Zfish   287 LNNRHGKRHGKKSKSRCSKKALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAI 351

  Fly   532 IMKILSTSGANKSLELVP--CCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            |..::::...|.:    |  ||...:.|.:.::.:||.|....|...:||||.||||
Zfish   352 IQTLMNSMDPNST----PPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 30/103 (29%)
gdf6aNP_001153466.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..304 5/40 (13%)

Return to query results.
Submit another query.