DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf2

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001165057.2 Gene:gdf2 / 563287 ZFINID:ZDB-GENE-100107-1 Length:389 Species:Danio rerio


Alignment Length:406 Identity:82/406 - (20%)
Similarity:164/406 - (40%) Gaps:73/406 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 ISVKSSAGGCPKCESNRQVEH---ITEEQLTHLR--IEFVKQQILEKLRLKESPKVSAVELPKPI 280
            |:.:.|.|.....|.:..::.   :.::.|..:.  :.|:|:..|.||.|...|:......|...
Zfish    17 ITEEKSLGDAGSLEDSMFIQEQKLVEDDDLNKVESFLGFMKEDFLRKLNLSGVPQEHRKVQPPQF 81

  Fly   281 FDGMTLSHPDDSTKNKELDDYYARTSKKFILLNREEVECNRARDGKSNPSMCFTFKIDDADAEGF 345
            ...:...:..|.......|     ..:.|::   ::|..:..:..|:...:.|...|.:.:    
Zfish    82 MIELYNRYASDKNSIPRSD-----VIRSFVV---QDVIYSIRQGNKTQHRLLFNVSIPNHE---- 134

  Fly   346 DVSTAVLWLF----KNKQNRTDT-ASVNSTSAQQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNV 405
            ::::..|.||    ::|....|. .|:|         |.:||.:|.....:|...:.:. :|:|.
Zfish   135 EITSVQLRLFTLWHRHKPACDDLFTSIN---------VYDVEYEQNAKILHLLDGRDVR-ESINT 189

  Fly   406 QDEWMKIDIEWPIKHWISGH----ELSHLIQITCGGCDVSDMEEIISVDKDYRPFIVI---DMQN 463
               |...|:...::.|....    |:...:|.:|...|:|     :|::.:....:::   |:.|
Zfish   190 ---WEAFDVTGAVRIWHESRRGAGEIQVEVQHSCDSFDIS-----LSLEDNSSAVVIVFSDDLGN 246

  Fly   464 RRRKS---------RQKRSINCSSGMTE-------------CCREHLYISFRDIGWSNWILKPEG 506
            |:.:|         |:::.:...:.::.             |.|..|.::|:||||..||:.|..
Zfish   247 RKEESMRKVKEMLVREQQQVGNQAPVSNRHRRRKRKAKNNYCRRTSLKVNFKDIGWDKWIVAPPE 311

  Fly   507 YNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTAT 571
            |:||.|:|.|....:...:.|.|:.|..:::.|...|:  .:.||...:...: .|:.......|
Zfish   312 YDAYECKGVCYFPLTDDVSPSRHAVIQTLVNLSNPKKA--NMACCVPTKLDPI-AVMYQEKGVIT 373

  Fly   572 VKTL-PNMVVESCGCR 586
            |:.| ..|.|..||||
Zfish   374 VRHLYEEMKVAKCGCR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 39/224 (17%)
TGF_beta 481..585 CDD:278448 31/117 (26%)
gdf2NP_001165057.2 TGFb_propeptide 60..222 CDD:279078 33/186 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..284 0/20 (0%)
TGF_beta 288..388 CDD:278448 31/102 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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