DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf10a

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_691459.3 Gene:gdf10a / 563003 ZFINID:ZDB-GENE-090312-17 Length:441 Species:Danio rerio


Alignment Length:123 Identity:41/123 - (33%)
Similarity:65/123 - (52%) Gaps:10/123 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 RRRKSRQKRSINCSSGMTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASH 528
            |||:.::.||         |.|.:|.:.|.||||:.|||.|:.::|::|.|:|..........|:
Zfish   329 RRRQWKEPRS---------CSRRYLKVDFADIGWNEWILSPKSFDAFYCAGTCEFPIPKVVRPSN 384

  Fly   529 HSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            |::|..|:...|....:. .|||..::...|.::.:|.|....:|..|||.||:|.||
Zfish   385 HATIQSIVKAVGIIPGIP-EPCCVPEKMKPLSVLFVDESKNIVLKIYPNMSVETCACR 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078
TGF_beta 481..585 CDD:278448 34/103 (33%)
gdf10aXP_691459.3 TGF_beta 337..440 CDD:278448 36/112 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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