DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and tgfb5

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_021336789.1 Gene:tgfb5 / 559723 ZFINID:ZDB-GENE-130425-3 Length:414 Species:Danio rerio


Alignment Length:444 Identity:114/444 - (25%)
Similarity:179/444 - (40%) Gaps:109/444 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 NITISVK---SSAGGCPKCESNRQVEHITEEQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKP 279
            |:|:.|.   :||.|...|.|....:|.::      |||.|:.|||.|||::..|...|...|:|
Zfish     5 NLTLLVLKLFASAEGFSTCHSYNLDDHKSK------RIEAVRGQILSKLRIRSPPDPEASPTPQP 63

  Fly   280 IFDGMTLSHPDDSTKN--KEL--------------DDYYARTSKKFILLNREEVECNRARDGKSN 328
            :...:.|.:  :|||.  ||.              :||||:..::..::.. ..:.|....|..:
Zfish    64 VPAEVMLLY--NSTKELLKERARHAEAACERESSEEDYYAKEVQRVNMMPL-RTDTNSISPGPQS 125

  Fly   329 PSMCFTFKIDDADAEGFDV-------STAVLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEVDQQ 386
            |    .|:|     .||||       ||.|         :.:.....:.:.|.......||:.|.
Zfish   126 P----YFRI-----VGFDVTNVERNSSTLV---------KAEFRIFRAPNPQARATEQRVEIYQI 172

  Fly   387 KDSKYLSAAKTIAIQSVNVQDE----WMKIDIEWPIKHWISGHE--LSHLIQITCGGCDV----- 440
            ..|:.::|.....|.|..|:..    |:.:|:...:|.|::..|  |...|.:.|..|..     
Zfish   173 LKSEDVTAPSQRYIDSRTVEPRAKGAWLSVDVTETVKEWMAFRERNLGLKISVHCPCCTFVPSTN 237

  Fly   441 ----SDMEEI----ISVDKDY-------------------RPFIVID------MQNRRRKSRQKR 472
                :..||:    ..:|.|.                   .|.:::.      :.:..:|:|:||
Zfish   238 NIVPNKSEELEARFAGIDDDLIKQTRKPGVTKGQIEFSTKTPHLILTLLPTDRLDSPIKKTRKKR 302

  Fly   473 SIN----CSSGMTECCREHLYISF-RDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSI 532
            |..    |:.....||...|||.| ||:.| .||.:|:||.|.||.|:|..:.|   |.:|::.|
Zfish   303 SAADTSICTRNDQGCCLRSLYIDFRRDLNW-KWIHEPKGYKANFCAGNCPYLWS---ADNHYNMI 363

  Fly   533 MKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            :.:.:.  .|......|||..:....|.:|.. ...|..|:.|.||||.||.||
Zfish   364 LPLYNK--MNPEASASPCCVPQDLEPLTIVYF-LGRTPRVEQLSNMVVRSCKCR 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 59/274 (22%)
TGF_beta 481..585 CDD:278448 38/104 (37%)
tgfb5XP_021336789.1 TGFb_propeptide 21..229 CDD:307025 56/234 (24%)
TGF_beta 317..413 CDD:306518 38/102 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12159
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
54.870

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