DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Gdf3

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001103141.1 Gene:Gdf3 / 500311 RGDID:1564178 Length:366 Species:Rattus norvegicus


Alignment Length:242 Identity:46/242 - (19%)
Similarity:100/242 - (41%) Gaps:62/242 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   391 YLSAAKTIAIQSVNVQDEW----------------------MKIDIEWPIKHWISGHELSHLIQI 433
            ||.....:|:..|..:..|                      ::.:::..:|.| :.|:|.:|   
  Rat   139 YLQLELVVAVSVVQDRGVWGRSHPKLGRLLVQKSVLGPQGSLQFNLQGVVKDW-NRHQLKNL--- 199

  Fly   434 TCGGCDVSDMEEIISVDKDYRP--------------------FIVIDMQNRRRKSRQKR-SINCS 477
                 |:. :|.::..|:..|.                    .:.:::::....||:|| :|...
  Rat   200 -----DLY-LEILVKEDRYSRVNAQLDNPCNQLMHSLHASLLVVTLNLKHCHPSSRKKRAAIPIP 258

  Fly   478 SGMTE--CCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSG 540
            .|:..  |.|..|:::|:|:||..|::.|:|:.|.:|.|.|....:....:|:::.:..::..:.
  Rat   259 KGLCRNLCHRHQLFVNFQDLGWHKWVIAPKGFMANYCHGDCPFTMTTYLNSSNYAFMQALMHMAD 323

  Fly   541 ANKSLELVP--CCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGC 585
            ..     ||  .|...:.|.:.::..|:.....::...:|||:.|||
  Rat   324 PR-----VPKAVCIPTKLSPISMLYQDNEKNVILRHYEDMVVDECGC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 24/103 (23%)
Gdf3NP_001103141.1 TGFb_propeptide 24..204 CDD:480997 11/74 (15%)
TGF_beta_SF 266..366 CDD:477357 26/105 (25%)

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