DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and gdf9

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001012383.1 Gene:gdf9 / 497643 ZFINID:ZDB-GENE-050221-7 Length:418 Species:Danio rerio


Alignment Length:315 Identity:61/315 - (19%)
Similarity:123/315 - (39%) Gaps:97/315 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 KQNR----TDTA-SVNSTSAQQTIVVS------------------EVEVDQQKDSK------YLS 393
            ||||    .|.: |:|...:|:.::.|                  .:::.:||.||      :|.
Zfish   115 KQNREFFMQDISYSLNRVRSQEHLLKSVLLYSFDHNHLSPFSLLCYLDMKEQKSSKDQMCSNHLG 179

  Fly   394 AAKTIAIQSVNVQDEWMKIDIEWPIKHWISGH--ELSHLIQITCGGCDVSDMEEIIS-------- 448
            ...::.:.|..|...|:::|:...:...|..|  ::..||.:||       :|::||        
Zfish   180 IQHSVPLLSFRVHHRWVEVDVTSFLHPLIQAHKKDIHLLINLTC-------VEDMISRPGGQIHK 237

  Fly   449 --VDKDYR-PFIVIDMQNR-----RRKSRQKRSINCSSG-------------------------- 479
              |:...| |.:::.:.:.     :|:|.|.|.::.:|.                          
Zfish   238 SPVELTPRSPSLLLYLNDTSEVAYQRRSTQGRMVDLTSNHWDGKSTLWELTSRRRRGTLKSSETS 302

  Fly   480 ----------MTECCREHLY---ISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSS 531
                      .|:.|  .||   :||:::...:||::|:.||..:|:|||.........:..|:.
Zfish   303 MPKLVPMYEFTTDDC--DLYDFRVSFKELKLDHWIIEPKKYNPRYCKGSCPRNVGFMYGSPMHTM 365

  Fly   532 IMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            :..::... .:.|:.. |.|...:|:.|.::..::..:...|....|:...|.||
Zfish   366 VQNLIYEK-LDSSVPR-PTCVPSEYNPLSVLTFENDKSYAYKEYEEMIATKCACR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 30/141 (21%)
TGF_beta 481..585 CDD:278448 24/106 (23%)
gdf9NP_001012383.1 TGF_beta 317..417 CDD:278448 23/103 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.