DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf9

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001012383.1 Gene:gdf9 / 497643 ZFINID:ZDB-GENE-050221-7 Length:418 Species:Danio rerio


Alignment Length:315 Identity:61/315 - (19%)
Similarity:123/315 - (39%) Gaps:97/315 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 KQNR----TDTA-SVNSTSAQQTIVVS------------------EVEVDQQKDSK------YLS 393
            ||||    .|.: |:|...:|:.::.|                  .:::.:||.||      :|.
Zfish   115 KQNREFFMQDISYSLNRVRSQEHLLKSVLLYSFDHNHLSPFSLLCYLDMKEQKSSKDQMCSNHLG 179

  Fly   394 AAKTIAIQSVNVQDEWMKIDIEWPIKHWISGH--ELSHLIQITCGGCDVSDMEEIIS-------- 448
            ...::.:.|..|...|:::|:...:...|..|  ::..||.:||       :|::||        
Zfish   180 IQHSVPLLSFRVHHRWVEVDVTSFLHPLIQAHKKDIHLLINLTC-------VEDMISRPGGQIHK 237

  Fly   449 --VDKDYR-PFIVIDMQNR-----RRKSRQKRSINCSSG-------------------------- 479
              |:...| |.:::.:.:.     :|:|.|.|.::.:|.                          
Zfish   238 SPVELTPRSPSLLLYLNDTSEVAYQRRSTQGRMVDLTSNHWDGKSTLWELTSRRRRGTLKSSETS 302

  Fly   480 ----------MTECCREHLY---ISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSS 531
                      .|:.|  .||   :||:::...:||::|:.||..:|:|||.........:..|:.
Zfish   303 MPKLVPMYEFTTDDC--DLYDFRVSFKELKLDHWIIEPKKYNPRYCKGSCPRNVGFMYGSPMHTM 365

  Fly   532 IMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            :..::... .:.|:.. |.|...:|:.|.::..::..:...|....|:...|.||
Zfish   366 VQNLIYEK-LDSSVPR-PTCVPSEYNPLSVLTFENDKSYAYKEYEEMIATKCACR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 23/104 (22%)
gdf9NP_001012383.1 TGF_beta_SF 313..418 CDD:477357 24/108 (22%)

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