DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and amh

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001007780.1 Gene:amh / 493624 ZFINID:ZDB-GENE-050706-192 Length:549 Species:Danio rerio


Alignment Length:570 Identity:109/570 - (19%)
Similarity:178/570 - (31%) Gaps:215/570 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 EDQQNQEKDLDL-DLDLD------------QQP-------ETPIEPELPLGERNITISVKSSAGG 229
            |:|.|..|...| :|:.|            |||       :||...|..  ..|..:|...|||.
Zfish    27 EEQDNNPKVNPLSELNGDQLEVRDLACVHRQQPTDQHATEDTPFNKEQK--TLNEFLSALKSAGE 89

  Fly   230 CPK------CES---NRQVEHI------------------------TEEQLT------------- 248
            ..|      |.|   :.||.|:                        .||.:|             
Zfish    90 LGKMDFLGTCSSETQSSQVSHLVQSVLQKQSGLKGVHATEDIWDADNEEGITLTLTFPKHSLPAG 154

  Fly   249 ----------------HLRIEFVKQQI---LEKLRLKESPKVSAVELPKPIFDGMTLSH------ 288
                            .||::|..|.|   .:.:.:.||.:...|.      .|.:..|      
Zfish   155 PASVMLLFSVNPVKGDSLRVQFNSQSIHPNTQTVCISESTRFLIVT------GGWSHGHIHLKLK 213

  Fly   289 ------PDDSTKN---KELDDYYAR-------TSKKFIL----LNREEVECNRARDGKSNPSMCF 333
                  .||:.:.   .||::...|       |.|..:|    |:...::.:|....:..||..:
Zfish   214 TMVETSMDDNRRKLSVSELNEVLMRKVDGSSTTIKPVLLFLSDLDEPHLKRHRIPQDERLPSRTY 278

  Fly   334 TFKI-------------------DDADAEGFDV------------------------STAVLWLF 355
            .|..                   ||..|...|.                        ||..:::|
Zfish   279 LFLCELQKFLRDILPQSKSTTPQDDPSAVSLDTLHSLPPLRLGVSSTESLLSGLVNSSTPTVFVF 343

  Fly   356 KNKQNRTDTASVNSTSAQQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMK-IDIEWPIK 419
            ..:|....|..|..|.....:.|..:.:|:             |:..|..|:...| ||      
Zfish   344 PQRQQGLQTHRVEVTLDSPLLSVLRMRLDE-------------AMAQVKQQEAGRKMID------ 389

  Fly   420 HWISGHELSHLIQITCGGCDVSDMEEIISVDKD--YRPFIVI--------DMQNRRRKSRQKRSI 474
                  .|..|.:::....|..|.|......|:  ||..:::        :.::.|.:...:...
Zfish   390 ------RLQKLTELSALSPDGEDSEAATKDHKEAQYRSVLLLKALQMVLSNWESERAQRAARADE 448

  Fly   475 NCSSGMTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIMK--ILS 537
            :..|...:|..:.|.:|.|     .:.|:|...|...|.|:|....:   .|::|:.::.  |.|
Zfish   449 DGPSASNQCHLQSLSVSLR-----KFFLEPSRANINNCEGTCGFPLN---NANNHAVLLNSHIQS 505

  Fly   538 TSGANKSLELVPCCTAKQYSSLQLVVMDSSNT-ATVKTLPNMVVESCGCR 586
            ....|:||    ||...:|..|.::.::|..| .:.||  |:|...|.||
Zfish   506 GQPVNRSL----CCVPVEYDDLCVIELESETTNISYKT--NVVATKCECR 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 53/317 (17%)
TGF_beta 481..585 CDD:278448 28/106 (26%)
amhNP_001007780.1 AMH_N 74..439 CDD:282552 64/397 (16%)
TGF_beta 455..548 CDD:278448 28/106 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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