DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf3

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001007905.1 Gene:gdf3 / 493288 XenbaseID:XB-GENE-487309 Length:350 Species:Xenopus tropicalis


Alignment Length:378 Identity:81/378 - (21%)
Similarity:149/378 - (39%) Gaps:89/378 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 IEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFILLNREE 316
            :.|.::.:|:.|.|...|...|   |.|:              .|.|.|.:.:.      :|::.
 Frog    19 LTFQERMLLKALGLNTRPNPIA---PGPV--------------PKSLRDIFEKG------INKDN 60

  Fly   317 --------VECNRARDGKS----------NPSMC---FTFKIDDADAEGFDVSTAVLWLFKNKQN 360
                    |..|..|..:.          ..|:|   |.|         ||:|..     :||:.
 Frog    61 PCMMEGFGVPGNIVRSYRDQGPVAAMEEPQESLCLKKFLF---------FDLSAV-----ENKEQ 111

  Fly   361 RT-----DTASVNSTSAQQ-------TIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMKID 413
            .|     .....||...||       |:.:|...:.:.|.::.|..:::..:...::.....|:.
 Frog   112 LTLGQLEIKFKHNSYYGQQFHLRLYRTLQLSLKGMRESKMNRKLLVSQSFRLLHKSLYFNLTKVA 176

  Fly   414 IEW--PIKHWISGHELSHLIQITCGGCDVSDMEEIISVDKDYRPFIVIDM------QNRRRKSRQ 470
            .:|  |.|:      :..|::|........| ....:|.:..:.||...:      .:..:..|.
 Frog   177 KDWKTPEKN------MGLLLEIYASSKLAGD-NRSFAVCEPIQSFIYTSLLTVSLDPSSCKTPRA 234

  Fly   471 KRSINCS--SGMTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIM 533
            |||.:.|  :....|.:..|||.|:|:||.||::.|.||.|.:|.|.|....:.....::| :::
 Frog   235 KRSTHSSPPTPSNICKKRRLYIDFKDVGWQNWVIAPRGYMANYCYGECPYPLTEMLRGTNH-AVL 298

  Fly   534 KILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            :.|..|...:|..| |||...:.|.:.::..|:::...::...:|||:.|||:
 Frog   299 QTLVHSVEPESTPL-PCCAPTKLSPISMLYYDNNDNVVLRHYEDMVVDECGCK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 31/101 (31%)
gdf3NP_001007905.1 TGFb_propeptide 23..197 CDD:480997 38/216 (18%)
TGF_beta_GDF1_3_like 249..350 CDD:381642 32/102 (31%)

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