DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and scw

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster


Alignment Length:424 Identity:77/424 - (18%)
Similarity:156/424 - (36%) Gaps:94/424 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 ETPIEPELPLGERNITISVKSSAGGCPKCESNRQVEHITEEQLTHLRIEFVKQQILEKLRLKESP 269
            |.||..:.||.|:...|.: ...|..|:    ||.|.......:...:|...:            
  Fly    27 EMPIYQKRPLSEQMEMIDI-LDLGDRPR----RQAEPNLHNSASKFLLEVYNE------------ 74

  Fly   270 KVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFILLNREE----VECN---------R 321
             :|..:.||.:.         .....:.|||        .||::.|:    ..||         :
  Fly    75 -ISEDQEPKEVL---------HQRHKRSLDD--------DILISNEDRQEIASCNSILTFSSRLK 121

  Fly   322 ARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEVDQQ 386
            .....:...|..||..:|...: ..:..|:|.::|.       .|:....|..|:.|.. ::|.:
  Fly   122 PEQLDNELDMHITFNTNDVPVD-LSLVQAMLRIYKQ-------PSLVDRRANFTVSVYR-KLDNR 177

  Fly   387 KDSKYLSAAKTIAIQSVNVQDEWMKIDIEWPIKHWI--SGHELSHLIQITCGGCDVSDMEEIISV 449
            :|..|....   ::.:.:.|..|::.::...:::|:  .|.:..:.::|:.|...:|.....:..
  Fly   178 QDFSYRILG---SVNTTSSQRGWLEFNLTDTLRYWLHNKGLQRRNELRISIGDSQLSTFAAGLVT 239

  Fly   450 DKDYR----PFIV---------IDMQNRR-RKSRQKR-------------SINCSSGMTECCREH 487
            .:..|    ||||         :.:|..| ::..:||             .::.......|.|.:
  Fly   240 PQASRTSLEPFIVGYFNGPELLVKIQKLRFKRDLEKRRAGGGSPPPPPPPPVDLYRPPQSCERLN 304

  Fly   488 LYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLEL-VPCC 551
            ..:.|:::...||::.|:.:.||||.|.|:........|::|:.:..::..    |...| .|||
  Fly   305 FTVDFKELHMHNWVIAPKKFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHL----KQPHLPKPCC 365

  Fly   552 TAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGC 585
            ......::.::...:.:...:......|.:.|||
  Fly   366 VPTVLGAITILRYLNEDIIDLTKYQKAVAKECGC 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 21/102 (21%)
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 44/261 (17%)
TGF_beta_BMP5_like 299..400 CDD:381639 23/105 (22%)

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