DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and mstna

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001004122.1 Gene:mstna / 445816 ZFINID:ZDB-GENE-050208-735 Length:366 Species:Danio rerio


Alignment Length:399 Identity:92/399 - (23%)
Similarity:167/399 - (41%) Gaps:73/399 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 LGERNITISVKSSA------------GGCPKCESNRQVEHITEEQLTHLRIEFVKQQILEKLRLK 266
            ||.:|..:|..::.            |.|..|:..:|.:        .||:..:|.|||..|||:
Zfish    13 LGSQNQNLSTTTTTTTQAFVTPGDDNGQCTTCQFRQQSK--------LLRLHSIKSQILSILRLE 69

  Fly   267 ESPKVS----AVELPK--PIFDGMTLSHPDDSTKNKELDDYYARTSKKFILLNREEVECNRARDG 325
            ::|.:|    .:.|||  |:.:.:     |...:|..:.:...:.|.:.|:....|.:......|
Zfish    70 QAPNISRDTVKLLLPKAPPLQELL-----DQYDQNGGISEDEEQASSETIITMATEPQAITQLVG 129

  Fly   326 KSNPSMC-FTFK---IDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEVDQQ 386
            .  |..| |...   :.|:      :..|:||::........|..:.         :|.:|...:
Zfish   130 M--PKCCMFALSPKILPDS------ILKALLWIYLRPAEEPTTVYIQ---------ISHLESSSE 177

  Fly   387 KDSKYLSAAKTIAIQSVNVQ-DEWMKIDIEWPIKHWISGHELSHLIQITCGGCDVSDM--EEIIS 448
            .::.....|:.|   .||.: :.|..||::..:|.|:...:.:..|:|.....:.:|:  ....|
Zfish   178 GNNHSRIRAQKI---DVNARTNSWQHIDMKQLLKLWLKQPQSNFGIEIKAFDANGNDLAVTSTES 239

  Fly   449 VDKDYRPFIVIDMQNRRRKSRQKRSINCSSGMTE--CCREHLYISFRDIGWSNWILKPEGYNAYF 511
            .::..:||:.:.:.:..::||:...::|....||  |||..|.:.|.|.|| :||:.|:.|.|.:
Zfish   240 GEEGLQPFLEVKISDTGKRSRRDTGLDCDEHSTESRCCRYPLTVDFEDFGW-DWIIAPKRYKANY 303

  Fly   512 CRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLP 576
            |.|.|      .|...|...:.|      ||......||||..:.|.:.::..:.........:|
Zfish   304 CSGEC------VQKYPHSHIVNK------ANPRGSAGPCCTPTKMSPINMLYFNDREQIIYGKIP 356

  Fly   577 NMVVESCGC 585
            :|||:.|||
Zfish   357 SMVVDLCGC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 46/226 (20%)
TGF_beta 481..585 CDD:278448 33/105 (31%)
mstnaNP_001004122.1 TGFb_propeptide 37..248 CDD:279078 49/243 (20%)
TGF_beta 275..365 CDD:278448 31/102 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I12159
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.