DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Actbeta

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_651942.2 Gene:Actbeta / 43826 FlyBaseID:FBgn0024913 Length:946 Species:Drosophila melanogaster


Alignment Length:727 Identity:146/727 - (20%)
Similarity:257/727 - (35%) Gaps:228/727 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLVCLALENRNVYNRLHARSHPSSRGDILRPHPKHQPHPHVQ----HTSQQLQQQHHIRQQRSRQ 70
            |:.|..:.:.|.|    |.:..|.:|..| .|...:|:.:..    ||...:..::|.....:::
  Fly   296 LINCNGISSSNYY----ASNLESHKGCTL-CHESGKPNIYTDKDNPHTDYNIYNKYHSNNNFNKK 355

  Fly    71 LK--HLEPDPTSEEDDVPITKREYYARLRRHVIHKRQHLLQQELSYNHPGSHSEQLKVPR--LWQ 131
            ..  |....|:.|              :|...| |||.|.:..||:....||    .:|:  :|:
  Fly   356 TNQPHNNIAPSDE--------------VRLESI-KRQILTKLGLSHKPNVSH----PLPKQFIWE 401

  Fly   132 ---------------------HLMEQEEKAHRHVSPPVELPIMYGDAPEESSLSSDDHFDDLSPL 175
                                 :|.::..|.....||...|....|...::.|.....|....||.
  Fly   402 TIYRVDGGRMIPNNAFGSSGKNLDQKTIKLRAFASPGSHLFNGRGGRTDQRSERDPSHHKYRSPF 466

  Fly   176 DF-------------VRNELMAE-DQQN-------QEKDLDLDLDLDQQPETPIEPELPLGERNI 219
            ||             :||..:.. |::|       :.:.|.::..:...|               
  Fly   467 DFTFNISKNNVYGKVLRNRSLERIDKKNSFLNGWTENRQLKINSQIASMP--------------- 516

  Fly   220 TISVKSSAGGCP---KCESNRQVEHITEEQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKPIF 281
             |.:||.....|   |..:.|:|..|...|             :.:..||:|        ..||.
  Fly   517 -IELKSHHNSSPKELKSGAVRKVNGINGTQ-------------MNENALKKS--------TYPID 559

  Fly   282 DGMTLSHPDDSTKNKEL--------DDYYARTSKKFILLNREEVECNRARDGKSN----PSM--- 331
            ...::.:...:.||.|:        :||..:|..|           ||..:|:|:    |::   
  Fly   560 INHSIDNKTHTGKNGEMSHNDYEYFNDYSVQTHDK-----------NRYHEGRSSIGYQPAIHNI 613

  Fly   332 ----------CFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQQTIVVSE------ 380
                      .|....::.|.|.|..:|..:..|..:..:.....:...|||...|.|:      
  Fly   614 EYENQKGHHESFADDHENIDHEDFFGNTQEIITFAEEGTQYRQYRILEFSAQNRRVPSQKLSIRS 678

  Fly   381 ----VEVDQQKDSKYLSAAKTIAIQ---------------------------SVNVQDE------ 408
                :.:| :..|.::..||::..:                           |:|:.::      
  Fly   679 AQIHIRID-KPHSLWIEKAKSLPEKHLLNTKRKWGANKPHHRIKIWVFQLSTSINITEKGIDKAI 742

  Fly   409 --------------WMKIDIEWPIKHWI--SGHELSHLIQITCGGCDVSDMEEIISVDK------ 451
                          |.|.|:...|:.|.  :.||...|: |.|.||.......:....|      
  Fly   743 IFRASFQVDPKNLGWQKFDLTDTIREWYGHTSHEKLRLL-IDCTGCGGRYSLHLFQTSKLRGNSS 806

  Fly   452 DY------RPFIVIDMQNRRRKSRQKRSINCSSGMT-ECCREHLYISFRDIGWSNWILKPEGYNA 509
            ||      |||:|:..::.|.:..::|:::|...:. :||:|..|:||:.:||.:||:.|.||.|
  Fly   807 DYLSTNPNRPFLVLHTESSRTRRVRRRAVDCGGALNGQCCKESFYVSFKALGWDDWIIAPRGYFA 871

  Fly   510 YFCRGSCS-SVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVK 573
            .:|||.|: |..:.....:.|:..::.....|....:.  |||...::||:.|:......... :
  Fly   872 NYCRGDCTGSFRTPDTFQTFHAHFIEEYRKMGLMNGMR--PCCAPIKFSSMSLIYYGDDGIIK-R 933

  Fly   574 TLPNMVVESCGC 585
            .||.|||:.|||
  Fly   934 DLPKMVVDECGC 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 53/309 (17%)
TGF_beta 481..585 CDD:278448 33/105 (31%)
ActbetaNP_651942.2 TGFb_propeptide 370..>509 CDD:279078 29/143 (20%)
TGF_beta 843..945 CDD:278448 33/104 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1385831at2759
OrthoFinder 1 1.000 - - FOG0000887
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X477
65.920

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