DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and myo

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_726604.1 Gene:myo / 43811 FlyBaseID:FBgn0026199 Length:598 Species:Drosophila melanogaster


Alignment Length:639 Identity:127/639 - (19%)
Similarity:242/639 - (37%) Gaps:201/639 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RRHVIHKRQH-LLQQELSYN------HPGSHSEQLKVPRLWQHLMEQEE---------------- 138
            |::..|.:.| .|:::...|      |...:|.:::.|..::..::.::                
  Fly    10 RKYKTHDQHHRTLKKKTRQNTSDTTVHIEVNSNEIQFPGSYRFNLDSKKINIGRMNILGHKRGNF 74

  Fly   139 KAHRHVSPPVELPI-----MYGDAPEESSLSSDDHFDDLSP-LDFVRNE---------------- 181
            :..|:|:..|.|.:     .|.. ||..|.|:..:.|  || :..:.||                
  Fly    75 RVTRYVTVTVLLILSTAVNAYAQ-PENKSFSNSSNND--SPEMVMLSNETNNSAKVLSEKNGSSS 136

  Fly   182 LMAEDQQNQEKDLDLDLDLDQQPETPIEPELPLGERNITISVKSSAGGCPKCESNR-------QV 239
            :.|:|:.|:...: ..:.:..:|          |:::..::..|..|...:.:|..       .:
  Fly   137 ISADDKINENMGI-FQMKVQSKP----------GKKSTPLAKVSEHGDLSRVQSVSLYRNTLINI 190

  Fly   240 EHITEEQLTHL----RIEFVKQQILEKLRLKESPKVS-AVELPKPIFDG---------------- 283
            |.:.:.||...    .||.:|..||.:|.||:.|.:: .:.:|:.|.|.                
  Fly   191 ESMLQRQLREKAKVDSIESIKMHILMRLNLKKLPNITKPISVPQNIIDNFYRDYNASSKTTVWNR 255

  Fly   284 -------------------MTLSHPDDSTKNKELDDYYARTSKKFIL---------------LNR 314
                               ||....:.|:...:.||  |.|..:|::               .|.
  Fly   256 MESIDESHLSINDTYGDHIMTDFFDESSSSQMQGDD--ANTVNEFLIDLNKNQAKKSDIPINTND 318

  Fly   315 EEVEC---------------------NRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNK 358
            ||.|.                     ||..|       .|.|:||.:.:   |:|.|.|.|:   
  Fly   319 EEYESILSHISSIYIFPEEIQPHVRHNRKVD-------VFRFQIDSSYS---DLSYATLHLY--- 370

  Fly   359 QNRTDTASVNSTSAQQTIVVSEVEVDQQKD-----SKYLSAAKTIAIQ-SVNVQD---------- 407
                 ....:..||.|..::.|::...:||     .:.:..|.|.:.. .|.:.:          
  Fly   371 -----LRGWDWISAHQPGLLEEIKKQPRKDIVVTIHRAIRVANTTSFNPKVKMFEFRHSIPSGLG 430

  Fly   408 EWMKIDIEWPIKHWISGHELSHLIQ-ITCGGCDVSDMEEIISVDKDYRPFIVIDMQ-NRRRKSRQ 470
            :|:.:|::     .:.|:..|::.| |...|.:......:::.|...:..:.:.:: ..::|.|:
  Fly   431 QWVAVDLK-----SLLGNLGSNMTQEILIKGAETWMKSLVVTTDNTSKNPLTVHIEIGSQKKHRR 490

  Fly   471 KRSI--NCSSGMTE--CCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQAASHHSS 531
            |||:  :|:....:  |||..|.::|...|| ::::.|..::||||.|.| .|..:.|....|  
  Fly   491 KRSVYMDCTENDHDMRCCRYPLKVNFTSFGW-HFVVAPTSFDAYFCSGDC-KVGYLEQYPHTH-- 551

  Fly   532 IMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGC 585
             :..|:||.       .|||:..:.|||.|:..|.::...:..:|||.||.|.|
  Fly   552 -LAALTTSA-------TPCCSPTKMSSLSLLYFDDNHNLVLSVIPNMSVEGCSC 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 55/306 (18%)
TGF_beta 481..585 CDD:278448 34/105 (32%)
myoNP_726604.1 TGF_beta 506..597 CDD:278448 34/102 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471853
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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