DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gbb

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001286786.1 Gene:gbb / 37778 FlyBaseID:FBgn0024234 Length:455 Species:Drosophila melanogaster


Alignment Length:404 Identity:85/404 - (21%)
Similarity:166/404 - (41%) Gaps:86/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 VKQQILEKLRLKESP-KVSAVEL------PKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFILL 312
            |..:|||.|.:.|.| .:|:.:|      ||.:.|.......::...:::.||.|.|..:.....
  Fly    64 VSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHRITAEEGLSDQDEDDDYERGHRSRRSA 128

  Fly   313 NREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTA----------SV 367
            :.||.|      |:...:.     |.|.|....|.|..::.....:.:..|..          .|
  Fly   129 DLEEDE------GEQQKNF-----ITDLDKRAIDESDIIMTFLNKRHHNVDELRHEHGRRLWFDV 182

  Fly   368 NSTSAQQTIVVSEVEVDQQ-KDSKYLSAAKTIAI------------------QSVNVQDE---WM 410
            ::......:|::|:.:.|. .:.|:|:|.:...|                  .|||...:   |:
  Fly   183 SNVPNDNYLVMAELRIYQNANEGKWLTANREFTITVYAIGTGTLGQHTMEPLSSVNTTGDYVGWL 247

  Fly   411 KIDIEWPIKHWISGHELSHLIQITCGGCDVSDMEEII--------SVDKDYRPFIV--------- 458
            ::::...:..|:...:.:|.|.|.....:..|.|..:        .||.:::||::         
  Fly   248 ELNVTEGLHEWLVKSKDNHGIYIGAHAVNRPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELI 312

  Fly   459 ----IDMQNRRRKS-----RQKRSINCSS--------GMTECCREHLYISFRDIGWSNWILKPEG 506
                ....:|.::|     ::|:|::.::        ....|..:.|||.|:|:||.:||:.|||
  Fly   313 KATAHSSHHRSKRSASHPRKRKKSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEG 377

  Fly   507 YNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTAT 571
            |.|::|.|.|:...:....|::|:.:..::......|..:  |||...:..:|.::...:.....
  Fly   378 YGAFYCSGECNFPLNAHMNATNHAIVQTLVHLLEPKKVPK--PCCAPTRLGALPVLYHLNDENVN 440

  Fly   572 VKTLPNMVVESCGC 585
            :|...||:|:||||
  Fly   441 LKKYRNMIVKSCGC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 48/249 (19%)
TGF_beta 481..585 CDD:278448 31/103 (30%)
gbbNP_001286786.1 TGFb_propeptide 44..305 CDD:279078 48/251 (19%)
TGFB 354..455 CDD:214556 33/103 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466518
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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