DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf3

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_571023.1 Gene:gdf3 / 30125 ZFINID:ZDB-GENE-980526-389 Length:355 Species:Danio rerio


Alignment Length:209 Identity:48/209 - (22%)
Similarity:98/209 - (46%) Gaps:29/209 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 SKYLS--AAKTIAIQSVNVQDEWMK------IDIEWPIKHWISGHELSHLIQITCGGCDVSDMEE 445
            |:.||  |..::.:...|:...|.|      :.:|..:.|      |::::.          ...
Zfish   165 SQTLSPGAHASVLVNLTNLAQSWRKPEKNFGMQLELQVMH------LNNMLH----------DHA 213

  Fly   446 IISVDKDYRPFIVIDMQNRRRKSRQKRSINCSSGMTE---CCREHLYISFRDIGWSNWILKPEGY 507
            .:.:...:...:|:.:...:.:||:|||.:....:|.   |....|||.|:|:||.:||:.|:||
Zfish   214 YVQIPDIHATLVVVSLNPLQCRSRRKRSASYYLPVTPSNVCKPRRLYIDFKDVGWQDWIIAPQGY 278

  Fly   508 NAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATV 572
            .|.:|.|.|....|.:...::|:.:..::.:.....:.:  |||...:.|.:.::..|:::...:
Zfish   279 LANYCHGECPFPLSESLNGTNHAILQTLVHSFDPKGTPQ--PCCVPIKLSPISMLYYDNNDNVVL 341

  Fly   573 KTLPNMVVESCGCR 586
            :...:|||:.||||
Zfish   342 RHYEDMVVDECGCR 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630 28/101 (28%)
gdf3NP_571023.1 TGFb_propeptide 27..199 CDD:480997 7/33 (21%)
TGF_beta_GDF1_3_like 254..355 CDD:381642 29/102 (28%)

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