DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Nodal

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001099864.1 Gene:Nodal / 294503 RGDID:1305994 Length:354 Species:Rattus norvegicus


Alignment Length:475 Identity:95/475 - (20%)
Similarity:155/475 - (32%) Gaps:170/475 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 HRHVSPPVELPIMYGDAPEESS-----LSSDDHFDDLSPLDFVRNELMAED----QQN------- 189
            |..|:....||:.....|...|     ||.  :.|.|...|.:|: |.|:|    .||       
  Rat    19 HPRVATAAALPLWTRGQPSSPSPLAYMLSL--YRDPLPRADIIRS-LQAQDVDVTGQNWTFTFDF 80

  Fly   190 ----QEKDL---DLDLDLDQQPETPIEPELPLGERNITISVKSSAGGCPK-----CESNRQVEHI 242
                ||:||   :|.|.|....::|.:..|       ||.:...|...|:     |.....:|.|
  Rat    81 SFLSQEEDLVWAELRLQLLSPMDSPTKGPL-------TIDIFHQAKPDPEQDPADCLERVWMERI 138

  Fly   243 TEEQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSK 307
            |   :|..::.|....             :.:|:.||:              :|.|.|  .|..:
  Rat   139 T---VTPSQVTFASDS-------------TVLEVTKPL--------------SKWLKD--PRALE 171

  Fly   308 KFILLNREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSA 372
            |.:               .|....|                    |    .|:.|....|.||| 
  Rat   172 KQV---------------SSQAGKC--------------------W----HQSHTQPVPVTSTS- 196

  Fly   373 QQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMKIDIEWPIKHWISGHELSHLIQITCGG 437
                 |..:..::.::.:.|..|..:          | :.:..|..:                  
  Rat   197 -----VLMLYSNRPQEQRQLGGATLL----------W-EAESSWRAQ------------------ 227

  Fly   438 CDVSDMEEIISVDKDYRPFIVIDMQNRRRKSRQKRSINCSSGMTECCREHLYISFRDIGWSNWIL 502
                  |..:||:             |....|::|..:.......|.|....:.|..|||.:||:
  Rat   228 ------EGQLSVE-------------RSGWGRRQRRHHLPDRSQLCRRVKFQVDFNLIGWGSWII 273

  Fly   503 KPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVP--CCTAKQYSSLQLVVMD 565
            .|:.||||.|.|.|.:........::|:.|..:|.....::    ||  ||...:...|.::.:|
  Rat   274 YPKQYNAYRCEGECPNPVGEEFHPTNHAYIQSLLKRYQPHR----VPSTCCAPVKTKPLSMLYVD 334

  Fly   566 SSNTATVKTLPNMVVESCGC 585
            :.. ..::...:|:||.|||
  Rat   335 NGR-VLLEHHKDMIVEECGC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 27/213 (13%)
TGF_beta 481..585 CDD:278448 29/105 (28%)
NodalNP_001099864.1 TGFb_propeptide 33..169 CDD:279078 38/177 (21%)
TGFB 254..353 CDD:214556 29/103 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354117
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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