DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Nodal

DIOPT Version :10

Sequence 1:NP_523461.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001099864.1 Gene:Nodal / 294503 RGDID:1305994 Length:354 Species:Rattus norvegicus


Alignment Length:226 Identity:46/226 - (20%)
Similarity:79/226 - (34%) Gaps:71/226 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 KLKNDEVR-----VKVHYCSLNTTDVKIIAGKHAELNVPLPFI-------PGHEF---------S 97
            ||||:.|.     :|..:...|..:..|.:.:...|....|||       ..:::         .
  Rat   477 KLKNENVTFALKCIKKRHIVDNRQEEHIYSERRILLETNCPFIVKMYRTYKDNKYVYMLLEACLG 541

  Fly    98 GEIVEIGQDN-------------------PHHFNRGDRVVVMNDLQDPNGGLISEAVVKNRD--- 140
            |||..:.:|.                   .:..|.|   ::..||:..|..|.::..||..|   
  Rat   542 GEIWSLLRDRGSFEEYTAKFCVGCVTEAFDYLHNNG---IIYRDLKPENLMLDTDGYVKLVDFGF 603

  Fly   141 ---------VWT---VPQSVPLKEMAVLPYGHGTALLTFALHCNLKENDLILITAGPAGMGLAAI 193
                     .||   .|:.|..:  .:|..|||.::..::|...:.|    |:|..|...|  :.
  Rat   604 AKKLKCGQRTWTFCGTPEYVAPE--IILNKGHGLSVDFWSLGILIFE----LLTGSPPFTG--SD 660

  Fly   194 DLAVSVYKAKVIAVCD-----TESSSDLVRQ 219
            .:.:..:..|.|...|     |:...||:|:
  Rat   661 QMIIYTFILKGIEKMDFPKKITKRPGDLIRK 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_523461.1 TGF_beta_INHB 483..585 CDD:381630
NodalNP_001099864.1 TGF_beta_NODAL 252..353 CDD:381637
Blue background indicates that the domain is not in the aligned region.

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