DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Nodal

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_038639.2 Gene:Nodal / 18119 MGIID:97359 Length:354 Species:Mus musculus


Alignment Length:472 Identity:96/472 - (20%)
Similarity:154/472 - (32%) Gaps:164/472 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 HRHVSPPVELPIMYGDAPEESS-----LSSDDHFDDLSPLDFVRNELMAED----QQN------- 189
            |........||:.....|...|     ||.  :.|.|...|.:|: |.|:|    .||       
Mouse    19 HPRAPTAAALPLWTRGQPSSPSPLAYMLSL--YRDPLPRADIIRS-LQAQDVDVTGQNWTFTFDF 80

  Fly   190 ----QEKDL---DLDLDLDQQPETPIEPELPLGERNITISVKSSAGGCPKCESNRQVEHITEEQL 247
                ||:||   :|.|.|....:.|.|..|       ||.:...|.|.|:.:....:|.|..|..
Mouse    81 SFLSQEEDLVWAELRLQLPGPMDIPTEGPL-------TIDIFHQAKGDPERDPADCLERIWMETF 138

  Fly   248 THL--RIEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFI 310
            |.:  ::.|....             :.:|:.||:              :|.|.|..|       
Mouse   139 TVIPSQVTFASGS-------------TVLEVTKPL--------------SKWLKDPRA------- 169

  Fly   311 LLNREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQQT 375
               .|:...:||......|   :|..:..|       ||.||.|:.|:                 
Mouse   170 ---LEKQVSSRAEKCWHQP---YTPPVPVA-------STNVLMLYSNR----------------- 204

  Fly   376 IVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMKIDIEWPIKHWISGHELSHLIQITCGGCDV 440
                      .::.:.|..|..:          | :.:..|..:                     
Mouse   205 ----------PQEQRQLGGATLL----------W-EAESSWRAQ--------------------- 227

  Fly   441 SDMEEIISVDKDYRPFIVIDMQNRRRKSRQKRSINCSSGMTECCREHLYISFRDIGWSNWILKPE 505
               |..:||:             |....|::|..:.......|.|....:.|..|||.:||:.|:
Mouse   228 ---EGQLSVE-------------RGGWGRRQRRHHLPDRSQLCRRVKFQVDFNLIGWGSWIIYPK 276

  Fly   506 GYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVP--CCTAKQYSSLQLVVMDSSN 568
            .||||.|.|.|.:........::|:.|..:|.....::    ||  ||...:...|.::.:|:..
Mouse   277 QYNAYRCEGECPNPVGEEFHPTNHAYIQSLLKRYQPHR----VPSTCCAPVKTKPLSMLYVDNGR 337

  Fly   569 TATVKTLPNMVVESCGC 585
             ..::...:|:||.|||
Mouse   338 -VLLEHHKDMIVEECGC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 29/215 (13%)
TGF_beta 481..585 CDD:278448 29/105 (28%)
NodalNP_038639.2 TGFb_propeptide 33..169 CDD:279078 39/172 (23%)
TGFB 254..353 CDD:214556 29/103 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850418
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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