DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and tig-2

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_504271.1 Gene:tig-2 / 178864 WormBaseID:WBGene00006570 Length:366 Species:Caenorhabditis elegans


Alignment Length:394 Identity:80/394 - (20%)
Similarity:143/394 - (36%) Gaps:115/394 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 EQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKF 309
            :.||....:.:.:||.|...:..:|...||:....:...|...:       |:|::|....:.  
 Worm    34 QPLTGQATDKIGEQIRELFNIDINPNGPAVKANNYVSTYMKRLY-------KQLENYEHGENH-- 89

  Fly   310 ILLNREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLWLFKNKQNRTDTASVNSTSAQ- 373
               |.|||....:.|                        ..|..:.:...:|.|..|.:...|: 
 Worm    90 ---NEEEVNAWLSAD------------------------RIVSHMAQEVSHRLDDGSYSIRFAKE 127

  Fly   374 -------QTIVVSEVEVDQQ----------KDSKYLSAAKTIAIQSVNVQDEWMKIDIEWPIKHW 421
                   |:||.:::.:..|          :|:..  ...|:.:.|   .|..:..|:...:..|
 Worm   128 HVPAKEGQSIVRAQLRIHIQGIVSPVFFYIEDTNL--PGDTVLVSS---DDPTVVTDVTTMVDRW 187

  Fly   422 ISGHELSHL----IQITCGGCDVSDMEEIISVDKDYRPFIVIDMQNRRR---KSRQKRSINCS-- 477
                  |||    :.|.......:|..:|       ..|:||.:::...   |.|.:||.:.:  
 Worm   188 ------SHLQLSTLPIVTARASTNDELKI-------EAFLVIALKDEDAGPPKKRSRRSASTTPI 239

  Fly   478 -------------SGMTE-------CCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASV 522
                         |...|       |.|:.||:.|..:||..|::.|||::|::|.|.||:..|.
 Worm   240 SAPPMRQKVKRSESAYFEKPNENERCQRKGLYVDFDILGWKQWVIAPEGFSAFYCSGDCSAPFSK 304

  Fly   523 TQAASHHSSIMKIL------STSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVE 581
            ...|:.|:.:...|      ||:.|.        |......|.:::.:|.:....:|...:|||:
 Worm   305 EMNATSHAIVQSTLHRVRPNSTTPAK--------CAPSSLGSYKILFVDQNKQVQIKRYRDMVVD 361

  Fly   582 SCGC 585
            .|||
 Worm   362 ECGC 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 39/234 (17%)
TGF_beta 481..585 CDD:278448 32/116 (28%)
tig-2NP_504271.1 TGF_beta_BMP5_like 264..366 CDD:381639 33/110 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.