DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and emb-30

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_499074.2 Gene:emb-30 / 176322 WormBaseID:WBGene00001284 Length:1027 Species:Caenorhabditis elegans


Alignment Length:539 Identity:102/539 - (18%)
Similarity:180/539 - (33%) Gaps:215/539 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HIRQQRSRQLKHLEPDPTSEEDDVPITKREYYARLRRHVIHKRQHLLQQ-ELSYNHPGSHSEQLK 125
            ::::..|:|.|   .|...:.|:|     ||..||.|....:|:.|::. ...:.......:.| 
 Worm   541 NLKELVSKQKK---KDLEDKFDEV-----EYLYRLERIAEVERKKLIETFHEKFRFADLDDDDL- 596

  Fly   126 VPRLWQHLMEQEEKAHRHVSPPVELPIMYGDAPEESSLSSDDHFDDLSPLDFVRNELMAEDQQNQ 190
            .|.|:|.|           ..|:::   :.|:..|.        :|.||       .:.||:...
 Worm   597 TPLLFQEL-----------DHPIDI---FTDSMMEQ--------NDSSP-------FLEEDEGEP 632

  Fly   191 EKDLDLDLDLDQQPETPIEPELPLGERNITISVKSSAGGCPKCESNRQVEHITEEQLTHLRIEFV 255
            |::       :|:|:...|||   ||..            |.|:.:| |....|::|:...:|.:
 Worm   633 EQE-------EQKPDEEPEPE---GEPQ------------PACDLDR-VGSFFEKELSQKALEVL 674

  Fly   256 KQ--QILEKLRLKESPKVSAVELPK----PIFDGM--TLSHP-----DDSTKNKELD-------- 299
            .:  :..:.:..:...:::::|:.|    .:.:.:  |||.|     |.:...|:|:        
 Worm   675 PKCDETFDCVLNERGSRMNSIEIQKMGILRVLEDLAATLSSPQKIHCDKAGNQKKLEVSFIYEIT 739

  Fly   300 ------------------DYYAR----------TSKKFILLNREEVEC--------------NRA 322
                              .||.|          .|.:..:|.:.|...              |..
 Worm   740 STPTHQGYQDAKISSVTPSYYKRHPFNQLSGMGRSIQVSVLQKNEFSSIVIVPTSDVLPEDENEV 804

  Fly   323 RDGKSNPSMCFTF-KIDDADAEGFDVSTAVLWLFKNKQNR----TDTASVNS------------- 369
            .|.......|:.| |||..    .|.|:|        :||    ||...|:|             
 Worm   805 NDHVEKLKRCYEFEKIDVT----VDKSSA--------ENRPPGETDAMEVDSNELRIDVDLGPVV 857

  Fly   370 --------------------------TSAQQ-TIVVSEV---------EVDQQKDSKYLSAAKTI 398
                                      ||||: |.|:|::         |:.:.||          
 Worm   858 PEYDTLIELSQVHPLHHGELVLLGKFTSAQEGTGVMSQMMRSISSYPHEIPEDKD---------- 912

  Fly   399 AIQSVNVQDEWMKIDIEWPIKH---WISGHELSHLIQITCGGC-----DVSDMEEIISVDKDYRP 455
            .....:.:|...:|.||..|.|   .::.:......:||.|..     .::|.|| .:|.|.:| 
 Worm   913 VFAKNSSEDGSSEIPIETLIIHPTIQLAAYLHDDGSKITIGDMKPEVPPIADYEE-KTVRKTFR- 975

  Fly   456 FIVIDMQNRRRKSRQKRSI 474
                |.|.||.:.|:...:
 Worm   976 ----DYQRRRERYREDMGV 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 59/338 (17%)
TGF_beta 481..585 CDD:278448
emb-30NP_499074.2 ANAPC4_WD40 2..56 CDD:289649
WD40 <21..118 CDD:225201
WD40 <23..122 CDD:295369
WD40 repeat 24..70 CDD:293791
WD40 repeat 75..111 CDD:293791
WD40 repeat 118..154 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.807993 Normalized mean entropy S5
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.