DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and Gdf5

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_032135.2 Gene:Gdf5 / 14563 MGIID:95688 Length:495 Species:Mus musculus


Alignment Length:476 Identity:98/476 - (20%)
Similarity:181/476 - (38%) Gaps:111/476 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 EQEEKAHRHVSPPVELPIMYGDAPEESSLSSDDHFDDLSPLDFVRNELMAEDQQNQEKDLDLDLD 199
            :..:.|.|.|:|..:||  .|.|..::.         .:|..|:                   |.
Mouse   107 QTRQAAARTVTPKGQLP--GGKASSKAG---------SAPSSFL-------------------LK 141

  Fly   200 LDQQPETPIEPELPLGERNIT-----ISVKSSAGGCPKCESNRQVEHITEEQLTHLRIEFVKQQI 259
            ..::|.||.||:.|.....||     :|:..:.....:...|..|:  .|..|.:....|:.:  
Mouse   142 KTREPGTPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVK--LEAGLANTITSFIDK-- 202

  Fly   260 LEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKFILLNRE--------- 315
                  .:..:..||...:.:||...|.  .|.....||.           :|.::         
Mouse   203 ------GQDDRGPAVRKQRYVFDISALE--KDGLLGAELR-----------ILRKKPLDVAKPAV 248

  Fly   316 -------EVECNRARDGKSNPSMCFTFKIDDADAEGFDVSTAVLW-LFKNKQNRTDTASVNSTSA 372
                   :::.:....|:...::.....:...|..|::|..  :| ||:|.:|          ||
Mouse   249 PSSGRVAQLKLSSCPSGRQPAALLDVRSVPGLDGSGWEVFD--IWKLFRNFKN----------SA 301

  Fly   373 QQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMKIDIEWPIKHWISGHELSHLIQITCGG 437
            |..:.:...|..:..|.:.|...:|    :..|.::.:.:......|..:..:|    |:...|.
Mouse   302 QLCLELEAWERGRAVDLRGLGFERT----ARQVHEKALFLVFGRTKKRDLFFNE----IKARSGQ 358

  Fly   438 CDVSDMEEIISVDKDYRPFIVIDMQNRRRKSRQKRSINCSSGMTECCREHLYISFRDIGWSNWIL 502
            .|.:..|.:.|..:..|    ..:.||:.| |..:::.     ..|.|:.|:::|:|:||.:||:
Mouse   359 DDKTVYEYLFSQRRKRR----APLANRQGK-RPSKNLK-----ARCSRKALHVNFKDMGWDDWII 413

  Fly   503 KPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVP--CCTAKQYSSLQLVVMD 565
            .|..|.|:.|.|.|..........::|:.|..::::...    |..|  ||...:.|.:.::.:|
Mouse   414 APLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDP----ESTPPTCCVPTRLSPISILFID 474

  Fly   566 SSNTATVKTLPNMVVESCGCR 586
            |:|....|...:|||||||||
Mouse   475 SANNVVYKQYEDMVVESCGCR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 37/230 (16%)
TGF_beta 481..585 CDD:278448 32/105 (30%)
Gdf5NP_032135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..162 17/84 (20%)
TGFb_propeptide 139..338 CDD:279078 41/256 (16%)
TGFB 394..495 CDD:214556 33/104 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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