DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment daw and Gdf10

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_665684.2 Gene:Gdf10 / 14560 MGIID:95684 Length:476 Species:Mus musculus


Alignment Length:126 Identity:41/126 - (32%)
Similarity:66/126 - (52%) Gaps:9/126 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 MQNRRRKSRQKRSINCSSGMTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCSSVASVTQA 525
            ||..||:...:..:        |.|.:|.:.|.||||:.||:.|:.::||:|.|:|.........
Mouse   360 MQKARRRQWDEPRV--------CSRRYLKVDFADIGWNEWIISPKSFDAYYCAGACEFPMPKIVR 416

  Fly   526 ASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGCR 586
            .|:|::|..|:...|....:. .|||...:.:||.::.:|.:..|.:|..|||.||:|.||
Mouse   417 PSNHATIQSIVRAVGIVPGIP-EPCCVPDKMNSLGVLFLDENRNAVLKVYPNMSVETCACR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078
TGF_beta 481..585 CDD:278448 35/103 (34%)
Gdf10NP_665684.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..301
TGF_beta 372..475 CDD:278448 35/111 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.