DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and Lefty1

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_034224.1 Gene:Lefty1 / 13590 MGIID:107405 Length:368 Species:Mus musculus


Alignment Length:429 Identity:97/429 - (22%)
Similarity:153/429 - (35%) Gaps:149/429 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 LDLDQQP---ETPIE-PELPLGERNITISV-----KSSAGGCPKCESNRQV--EHITEEQLTHLR 251
            |.|||.|   :..:| ..:|...|...:::     .|.:.|....::.|:|  ..:..|..|||.
Mouse    35 LQLDQPPVLDKADVEGMVIPSHVRTQYVALLQHSHASRSRGKRFSQNLREVAGRFLVSETSTHLL 99

  Fly   252 IEFVKQQ-------ILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELDDYYARTSKKF 309
            :..::|:       :...|||.:.|      :|:...           .:.|.|..:.||.    
Mouse   100 VFGMEQRLPPNSELVQAVLRLFQEP------VPRTAL-----------RRQKRLSPHSARA---- 143

  Fly   310 ILLNREEVECNRARDGKSNPSMCFTFK---IDDADAEGFDVSTAV-LWLFKNKQNRTDTASVNST 370
                |..:|..|.||..||.:.....:   |.::..:.|||:.|| .|                 
Mouse   144 ----RVTIEWLRFRDDGSNRTALIDSRLVSIHESGWKAFDVTEAVNFW----------------- 187

  Fly   371 SAQQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDE------WMKIDIEWPIKHWISGHELSH 429
                          ||     ||..:...:..|:||.|      |             |.|:|..
Mouse   188 --------------QQ-----LSRPRQPLLLQVSVQREHLGPGTW-------------SSHKLVR 220

  Fly   430 L-IQITCGGCDVSDME-EIISVD-KDYRPFIVIDMQNRRRKSRQKRSINC------SSGMTECCR 485
            . .|.|..|....:.: |:.::| |||      ..|.           ||      :.| |.|||
Mouse   221 FAAQGTPDGKGQGEPQLELHTLDLKDY------GAQG-----------NCDPEAPVTEG-TRCCR 267

  Fly   486 EHLYISFRDIGWS-NWILKPEGYNAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVP 549
            :.:|:..:.:.|: ||||:|.|:..|.|.|||..:.         .|:.......|..:      
Mouse   268 QEMYLDLQGMKWAENWILEPPGFLTYECVGSCLQLP---------ESLTSRWPFLGPRQ------ 317

  Fly   550 CCTAKQYSSLQLVVMDSSNTAT---VKTLPNMVVESCGC 585
             |.|.:.:||.::|.......|   |.:||||.|::|.|
Mouse   318 -CVASEMTSLPMIVSVKEGGRTRPQVVSLPNMRVQTCSC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 48/233 (21%)
TGF_beta 481..585 CDD:278448 32/107 (30%)
Lefty1NP_034224.1 TGFb_propeptide <106..211 CDD:279078 31/165 (19%)
TGF_beta 263..355 CDD:278448 32/107 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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