DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and tgfb1

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002939433.1 Gene:tgfb1 / 100498430 XenbaseID:XB-GENE-488111 Length:381 Species:Xenopus tropicalis


Alignment Length:393 Identity:98/393 - (24%)
Similarity:161/393 - (40%) Gaps:95/393 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 EQLTHLRIEFVKQQILEKLRLKESPKVSAVELPKPIFDGMTLSHPDDSTKNKELD---------- 299
            |::...|||.::.|||.||:|..:|.|.:        :.||:.....|..|..|:          
 Frog    31 EEVRKRRIEAIRGQILSKLKLDRTPDVDS--------ENMTVPSEAISLYNSTLEVIRERAAKEE 87

  Fly   300 ----------DYYARTSKKFILLNREEVECNRARDGKSNPSMCFTFKIDDADAEGFDVST----A 350
                      ||||:...:|..:|          :.|.| ...|||..... .|...:.:    |
 Frog    88 APVWQEHNIQDYYAKQVHRFESIN----------ELKEN-EFLFTFNASHV-RENVGMKSLLHHA 140

  Fly   351 VLWLFKNKQNRTDTASVNSTSAQQTIVVSEVEVDQQKDSKYLSAAKTIAIQSVNVQDEWMKIDIE 415
            .|.:::.||  ||.   |.....:....:..:.....|||:.:|.         ..|||:..|:.
 Frog   141 ELRMYRKKQ--TDK---NVEQRMELYAGNGTDYSGYLDSKFFTAV---------TDDEWVSFDVT 191

  Fly   416 WPIKHWISGHELSHLIQI--TCGGCDVSDMEEIISV---------------DKDYRPFIVIDMQN 463
            ..:..|::..|.:...::  .| .|.::...::||:               |...:|:::|....
 Frog   192 KTVNEWLNHAEENEEFRLKPAC-KCSITTHSKVISIEGFSILRGDLMNLGGDDLKKPYLLITSMP 255

  Fly   464 RRR-----KSRQKRSIN---C--SSGMTECCREHLYISFR-DIGWSNWILKPEGYNAYFCRGSCS 517
            ..|     .||:||.:.   |  :|| ..||.:.|||:|| |:|| .||.:|:||.|.:|.|:|.
 Frog   256 AERIDTVSHSRRKRGVGQEYCFGNSG-PNCCVKPLYINFRKDLGW-KWIHEPKGYEANYCLGNCP 318

  Fly   518 SVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATVKTLPNMVVES 582
            .:.|..   :.:|.::.:.:.:  |....:.|||.......|.::.....| |.|:.|.||||.|
 Frog   319 YIWSTD---TQYSKVLSLYNQN--NPGASISPCCVPDVLEPLPIIYYVGRN-AKVEQLSNMVVRS 377

  Fly   583 CGC 585
            |.|
 Frog   378 CHC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 52/253 (21%)
TGF_beta 481..585 CDD:278448 36/104 (35%)
tgfb1XP_002939433.1 TGFb_propeptide 22..250 CDD:366248 52/253 (21%)
TGF_beta_TGFB1 283..381 CDD:381654 37/105 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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