DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and gdf5

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:XP_002662587.1 Gene:gdf5 / 100334210 ZFINID:ZDB-GENE-990415-39 Length:474 Species:Danio rerio


Alignment Length:131 Identity:43/131 - (32%)
Similarity:71/131 - (54%) Gaps:13/131 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 QNRRRKS---RQKRSINCSSGMTECCREHLYISFRDIGWSNWILKPEGYNAYFCRGSCS-SVASV 522
            |.|.|::   |.|:.|  .:....|.|:.|:::|:::||.:||:.|..|.|:.|.|.|. .:.|.
Zfish   351 QRRMRRAPLPRGKKPI--KNPKQRCNRKQLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSH 413

  Fly   523 TQAASHHSSIMKILSTSGANKSLELVP--CCTAKQYSSLQLVVMDSSNTATVKTLPNMVVESCGC 585
            .:..:|  :|::.|..|...:|   .|  ||...:.|.:.::.:||:|....|...:||||||||
Zfish   414 LEPTNH--AIIQTLMNSMDPRS---TPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGC 473

  Fly   586 R 586
            |
Zfish   474 R 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078
TGF_beta 481..585 CDD:278448 34/106 (32%)
gdf5XP_002662587.1 TGFb_propeptide 138..320 CDD:279078
TGF_beta 371..473 CDD:278448 34/106 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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