DRSC/TRiP Functional Genomics Resources

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Protein Alignment daw and nodal3.2

DIOPT Version :9

Sequence 1:NP_001259967.1 Gene:daw / 33474 FlyBaseID:FBgn0031461 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001106377.1 Gene:nodal3.2 / 100127175 XenbaseID:XB-GENE-6458522 Length:401 Species:Xenopus tropicalis


Alignment Length:402 Identity:73/402 - (18%)
Similarity:146/402 - (36%) Gaps:121/402 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 PIFDGMTLSHPDDSTKNKELD----DYYARTSKKFILLNREEVECNRARD--GKSNPSMCFTFKI 337
            |...|.....|....|....|    |::.|....|::...:.:...|.:|  ...:|::      
 Frog    21 PALQGRKAISPASILKGPSTDNGARDFHGRKFPHFMMQLYQNIISRRDKDLSNLEHPTL------ 79

  Fly   338 DDADAEGFDVSTAVLWLFKNKQNR----TDTASVNST----SAQQTIVVSE--------VEVDQQ 386
                .|...|.:.:...:..|.|.    .|.:|::::    ||:..|.:..        ||:...
 Frog    80 ----QESDTVQSFIAKSYTTKGNHWTLFFDMSSISTSNELKSAELRICLPSFGKSHSVTVEIYHT 140

  Fly   387 KDSK---YLSAAKTIAIQSVN----------------------VQDEWM---------------- 410
            ||.|   ::.:.||....:::                      ::||::                
 Frog   141 KDDKEKLFMGSFKTKISSALDADCKVFNLTMVLHNYLTKGKRLIKDEYIQAKGLLLRDLEKSATE 205

  Fly   411 ----KIDIEWPIKHWISGHELSHLIQITCGGCDVSDMEEIISVDKDY-RP-------------FI 457
                ::||....||.:|......:|.:            :.:.:||: :|             :.
 Frog   206 TGAERVDIVKQDKHHVSDFSAERIILV------------VFAKEKDHAKPDPPSLGKKLFPSKYG 258

  Fly   458 VIDMQN-----RRRKSRQKRSINCSSGMT----------ECCREHLYISFRDIGWSNWILKPEGY 507
            :.|..|     ||.:..:|.......|.|          :|.:..:::.|:.|||.:||:.|:.|
 Frog   259 MADSANKVNGFRRLRRNKKEKTRMDVGTTPPKPVEEIKPKCRKVDMFVDFQKIGWGSWIVYPKAY 323

  Fly   508 NAYFCRGSCSSVASVTQAASHHSSIMKILSTSGANKSLELVPCCTAKQYSSLQLVVMDSSNTATV 572
            |||.|..:|:...:.|..|:::|.|..:|..|..::  ...|.|...:..|:.::..::.: ..:
 Frog   324 NAYRCESACAVPLNETDDATNYSYIKSLLPLSDTDR--RECPSCVPVKMRSMSMLYYENED-FVL 385

  Fly   573 KTLPNMVVESCG 584
            :....|:||.||
 Frog   386 RHHEEMIVEECG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dawNP_001259967.1 TGFb_propeptide 244..458 CDD:279078 38/259 (15%)
TGF_beta 481..585 CDD:278448 29/114 (25%)
nodal3.2NP_001106377.1 TGFb_propeptide 53..220 CDD:279078 25/176 (14%)
TGFB 299..399 CDD:214556 28/102 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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