DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and SYTL5

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001156806.1 Gene:SYTL5 / 94122 HGNCID:15589 Length:752 Species:Homo sapiens


Alignment Length:545 Identity:118/545 - (21%)
Similarity:201/545 - (36%) Gaps:150/545 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNAKSETDAKP--EAEPAPAS-------------EPAADL---ESVDQKLEETHH---------- 39
            |.:.......|  ::.|||::             |.:.||   |...|:|.::|.          
Human   248 PKSSRSNGVTPGTQSSPAPSTRTVTSVISREYGFENSMDLAAIEGTSQELTKSHRRNTSGTPSIA 312

  Fly    40 ----SKFREVDRQE---QEVLAEKAAEAASQRIAQVE-STTRSATTEAQESTTTAVPVIKKIEHV 96
                |...:..|.|   .|...|.:.:..|.|...|. :..:.:..|.:||....|.        
Human   313 VSGTSLSSDQSRSELDLSESFTEDSEDTVSIRSKSVPGALDKDSLEETEESIDALVS-------- 369

  Fly    97 GEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGV--------- 152
            .::.|......:||.|                             .::.|..:|..         
Human   370 SQLSTNTHRLASGLST-----------------------------SSQAGSDRKWTYLNVPDADS 405

  Fly   153 DMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAE 217
            |..|:..:.|.|              :|.||..:.:..   |.:...:.|.:.:..|.:.|....
Human   406 DTTSLNSMMSVY--------------SETGDYGNVKVS---GEILLHISYCYKTGGLYIFVKNCR 453

  Fly   218 ELPALD-MGGTSDPYVKVYLLPDKKK--KFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFA 279
            .|...| ....:|.|||.||||||.:  |.:||:...| :|.||||..: ::.:.....:||..:
Human   454 NLAIGDEKKQRTDAYVKSYLLPDKSRNNKRKTKIRTGT-NPEFNETLKY-TISHTQLETRTLQLS 516

  Fly   280 IFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEW---RDLVSVEGEGGQEKLGDICFSLRYVP---- 337
            ::.:|||.::..:|||::|..:.:.....:||   :..|....:.|.:..|::...|||:|    
Human   517 VWHYDRFGRNSFLGEVEIPFDSWNFENPTDEWFVLQPKVEFAPDIGLQYKGELTVVLRYIPPEEN 581

  Fly   338 -------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLK 377
                                     :.|.|.|.|.|||||..:..||.||.:||..::.:..:..
Human   582 LMLPPEQLQGNKTFKKGKKKESPVISGGILEVFIKEAKNLTAVKSGGTSDSFVKGYLLPDDSKAT 646

  Fly   378 KKKTSIKKCTLNPYYNESFSFE-VPFEQIQKICLVVTVVDYDRI-------------GTSEPIGR 428
            |.||.:.|.::||.:|.:|.|. :..:.|:.:||.:|:.|.:..             |:....|:
Human   647 KHKTLVIKKSVNPQWNHTFMFSGIHPQDIKNVCLELTIWDKEAFSSNIFLGGVRLNSGSGVSHGK 711

  Fly   429 CILGCMGTGTELRHWSDMLASPRRP 453
            .:......|.|.|.|..|..:|..|
Human   712 NVDWMDSQGEEQRLWQKMANNPGTP 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 27/166 (16%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 36/129 (28%)
C2B_Synaptotagmin-1 326..461 CDD:176047 43/171 (25%)
SYTL5NP_001156806.1 PHD_SF 11..123 CDD:328929
FYVE_Slp5 62..108 CDD:277305
CEP170_C <159..>309 CDD:317681 12/60 (20%)
C2A_SLP-4_5 429..552 CDD:175995 36/127 (28%)
C2B_SLP_1-2-3-4 566..744 CDD:175987 43/171 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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