DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and SYTL4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001357091.1 Gene:SYTL4 / 94121 HGNCID:15588 Length:676 Species:Homo sapiens


Alignment Length:554 Identity:138/554 - (24%)
Similarity:230/554 - (41%) Gaps:143/554 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ESVDQKLEETHHSKFREV--------DRQ-EQEVLAEKAAEAASQRIAQVESTTRSATTEAQEST 83
            |:|.|.|  .|.::..::        :|| |..||.|.....:.:...:.||.:..:.|...:||
Human   150 ETVGQSL--LHQTQMGDIWPGRKIIQERQKEPSVLFEVPKLKSGKSALEAESESLDSFTADSDST 212

  Fly    84 TTAVPVIKKIEHVGEVVTEVIAERTGL-PTWGVVAI-------------IILVFLVVFGIIFFCV 134
            :....:                :::|| |.|..::.             ..:||:....:||   
Human   213 SRRDSL----------------DKSGLFPEWKKMSAPKSQVEKETQPGGQNVVFVDEGEMIF--- 258

  Fly   135 RRFLKKRRTKDGKGKKGVDMKSVQL------LGSAYKE--KVQPDMEELTENAEEGDEED----- 186
            ::..:|........|..:|::...:      ||...|.  .:..|||      ||.:|||     
Human   259 KKNTRKILRPSEYTKSVIDLRPEDVVHESGSLGDRSKSVPGLNVDME------EEEEEEDIDHLV 317

  Fly   187 KQSEQKL---------------------------------GRLNFKLEYDFNSNSLAVTVIQAEE 218
            |...|||                                 ||:.|.|:|:..:.||.|.|.:..:
Human   318 KLHRQKLARSSMQSGSSMSTIGSMMSIYSEAGDFGNIFVTGRIAFSLKYEQQTQSLVVHVKECHQ 382

  Fly   219 LPALDMG-GTSDPYVKVYLLPDKKK--KFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAI 280
            |...|.. ..|:||||.||||||.:  |.:|.:.|.|::|:::||..:: :|.:....:||.|::
Human   383 LAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTINPLYDETLRYE-IPESLLAQRTLQFSV 446

  Fly   281 FDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDL---VSVEGEGG-QEKLGDICFSLRYVPTA-- 339
            :...||.::..:||.::.:.:..|.:.::....|   :|.|...| ....|::..||:|:|.:  
Human   447 WHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISAESPTGLPSHKGELVVSLKYIPASKT 511

  Fly   340 --------------GKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNP 390
                          |:|.|.|.|||||.....||.||.:||..::....:..|:||.:.|.||||
Human   512 PVGGDRKKSKGGEGGELQVWIKEAKNLTAAKAGGTSDSFVKGYLLPMRNKASKRKTPVMKKTLNP 576

  Fly   391 YYNESFSFE-VPFEQIQKICLVVTVVDYDRIGTSEPIG----------------RCILGCMGTGT 438
            :||.:|.:. |..|.:|.:||.:||.|.:.:.:::.:|                .|:| |..|..
Human   577 HYNHTFVYNGVRLEDLQHMCLELTVWDREPLASNDFLGGVRLGVGTVNIQPILIECLL-CARTRG 640

  Fly   439 ELRHWSDMLASPRRPIAQ-WHTLKDPEETDEILK 471
            .|...:||......|..| .|.|    .|.:|.|
Human   641 RLSSCTDMCTDKCDPDCQELHNL----PTKKIYK 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 16/118 (14%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 41/162 (25%)
C2B_Synaptotagmin-1 326..461 CDD:176047 50/168 (30%)
SYTL4NP_001357091.1 PHD_SF 8..121 CDD:473978
FYVE_Slp4 58..107 CDD:277303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..243 8/59 (14%)
C2A_SLP-4_5 357..481 CDD:175995 38/124 (31%)
C2B_SLP_1-2-3-4 496..>622 CDD:175987 40/125 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.