DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and SYT12

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_024304534.1 Gene:SYT12 / 91683 HGNCID:18381 Length:487 Species:Homo sapiens


Alignment Length:503 Identity:124/503 - (24%)
Similarity:218/503 - (43%) Gaps:106/503 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PNAKSETDAKPEAEPAPASEPAADLESVDQKLEETH----------------------------- 38
            |..:.:|.|.|..|   .:..|||:.:||  :.|.|                             
Human    45 PGNEMKTKAPPVGE---VTVTAADIMAVD--VAEYHLSVIKSPPGWEVGVYAAGALALLGIAAVS 104

  Fly    39 ------------HSKFREVD-RQEQEVLAEKAAEAASQRIAQVESTTRSATTEAQESTTTAVPVI 90
                        .|.|...| |..|:...|..|||..:|:....:  :.|:|....|...::.:.
Human   105 LWKLWTSGSFPSPSPFPNYDYRYLQQKYGESCAEAREKRVPAWNA--QRASTRGPPSRKGSLSIE 167

  Fly    91 KKIEHVGEV-VTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGVDM 154
            ...|.:.|: ..|::.....|..:|.                      |:|.::.|       .:
Human   168 DTFESISELGPLELMGRELDLAPYGT----------------------LRKSQSAD-------SL 203

  Fly   155 KSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEEL 219
            .|:..:.:.:.:                       :..||::...:|||..|::|.|.|:|.::|
Human   204 NSISSVSNTFGQ-----------------------DFTLGQVEVSMEYDTASHTLNVAVMQGKDL 245

  Fly   220 PALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFD 284
            ...:.......:::|.||||::....:::.|...|..|:|.|:....|.| ...|:|.|::|..|
Human   246 LEREEASFESCFMRVSLLPDEQIVGISRIQRNAYSIFFDEKFSIPLDPTA-LEEKSLRFSVFGID 309

  Fly   285 RFSKHDQIGEVKVPLCTIDL-AQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILE 348
            ...::...|.|::.|..:|| .|....|  |...:.....:.:|:|..||.|:|||.:||||:::
Human   310 EDERNVSTGVVELKLSVLDLPLQPFSGW--LYLQDQNKAADAVGEILLSLSYLPTAERLTVVVVK 372

  Fly   349 AKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVT 413
            ||||...:....:||:||:.::|:|:::.||||::|:...||.:||:..|.||...:|.:.|.||
Human   373 AKNLIWTNDKTTADPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFSVPAIVLQDLSLRVT 437

  Fly   414 VVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLK 461
            |.:....|..:.:|..|:|...:|....||:.|||:.|||::.||.::
Human   438 VAESSSDGRGDNVGHVIIGPSASGMGTTHWNQMLATLRRPVSMWHAVR 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 29/173 (17%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 36/124 (29%)
C2B_Synaptotagmin-1 326..461 CDD:176047 54/134 (40%)
SYT12XP_024304534.1 C2 218..329 CDD:326325 31/111 (28%)
C2B_Synaptotagmin-12 350..485 CDD:176051 54/134 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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