DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and SYT8

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_011518757.1 Gene:SYT8 / 90019 HGNCID:19264 Length:539 Species:Homo sapiens


Alignment Length:395 Identity:156/395 - (39%)
Similarity:223/395 - (56%) Gaps:46/395 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 TTAVPVIKKIEHVGEVVTEVIAERTGLPTW----GVVAIIILVFLVVFGIIFFCVRRFLKKRRTK 144
            |||:|         .::.:::| .|..|.|    |.:|..:|:...:......|.||..||.|.|
Human   168 TTAIP---------GLIPDLVA-GTPWPRWALIAGALAAGVLLVSCLLCAACCCCRRHRKKPRDK 222

  Fly   145 DGKGKKGVDMKSVQLLGSA----YKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFN 205
            :..|           ||||    ....||||::.|  .:..||      .|:.|.|...||:||.
Human   223 ESVG-----------LGSARGTTTTHLVQPDVDGL--ESSPGD------AQQWGCLQLSLEFDFG 268

  Fly   206 SNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYAD 270
            |..:.|.:.||.:|..   |||.|||.:|.:......:.||||||.||.|||:||..| .:|.|:
Human   269 SQEIRVGLRQAADLRP---GGTVDPYARVSVSTQAGHRHETKVHRGTLCPVFDETCCF-HIPQAE 329

  Fly   271 AMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRY 335
            ....||...:|:|.|||.|:.:||:::||.|:||...:|.|. |:........|::|::||||||
Human   330 LPGATLQVQLFNFKRFSGHEPLGELRLPLGTVDLQHVLEHWY-LLGPPAATQPEQVGELCFSLRY 393

  Fly   336 VPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEV 400
            ||::|:||||:|||:.|:.    ||::||||:.:|.|.::.||:||:.||.|..||:||:|:|.|
Human   394 VPSSGRLTVVVLEARGLRP----GLAEPYVKVQLMLNQRKWKKRKTATKKGTAAPYFNEAFTFLV 454

  Fly   401 PFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEE 465
            ||.|:|.:.||:.|.|......:||:|:..||...:|..|:||:||||..||||||.|.|:...|
Human   455 PFSQVQNVDLVLAVWDRSLPLRTEPVGKVHLGARASGQPLQHWADMLAHARRPIAQRHPLRPARE 519

  Fly   466 TDEIL 470
            .|.:|
Human   520 VDRML 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 12/55 (22%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 52/123 (42%)
C2B_Synaptotagmin-1 326..461 CDD:176047 68/134 (51%)
SYT8XP_011518757.1 C2 257..370 CDD:301316 50/116 (43%)
C2 385..514 CDD:301316 68/132 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
65.880

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