DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and TCB3

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_013639.1 Gene:TCB3 / 854903 SGDID:S000004537 Length:1545 Species:Saccharomyces cerevisiae


Alignment Length:390 Identity:76/390 - (19%)
Similarity:161/390 - (41%) Gaps:99/390 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EPAADLESVDQKLEETHHSKFREVDRQEQEVLAEKAAEAASQRIAQVE----STTRSATTEA--- 79
            |...::|.::::|:| ...|| |..::|.|...||  ......:|::|    |..:....:|   
Yeast   939 EELVNVEKLEKELKE-KKKKF-EATQEENEQEMEK--NPKEWEVAEIEDPFDSDEKKINRKAKLS 999

  Fly    80 ------QESTTTAVPVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFL 138
                  |:|...::.:::..........|::|:....|                  :|.|:    
Yeast  1000 LNELIKQKSGILSMQILEGTLSPSSAYLEILADDISYP------------------VFICM---- 1042

  Fly   139 KKRRTKDGKGKKGVDMKSVQLLGSAY--------KEKVQPDMEE-LTENAEEGDEEDKQSEQKLG 194
                 |..:||...:|.::.:....|        |:.:..|.:: ::|.:....:..||:.::..
Yeast  1043 -----KPSQGKLNSEMANIFIRDLNYSKLHFRVSKKHIAKDSDDVISETSYSTLKLLKQAYEEPM 1102

  Fly   195 RLNF---KLEYDF----------------NSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDK 240
            .|||   |::..|                ::..|.:.:|....|.:.|..|.|||:|.:::  :.
Yeast  1103 WLNFNGSKMKVRFLYTPTSVKLPSSESVEDTGYLNIKLISGHGLKSADRNGYSDPFVHIFV--ND 1165

  Fly   241 KKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLA 305
            ||.|::.:.:|||.||:||.   ..:|........::|.:.|:||...:|.:|:..:.:.::::.
Yeast  1166 KKVFKSNIKKKTLDPVWNED---AKIPILSRSKNQVIFNVLDWDRAGDNDDLGQASLDVSSLEVG 1227

  Fly   306 QTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDV--GGLSDPYVKIA 368
            :|. .|.  :::..:|..:..|.  |:..|:..:               .|:  ||::|..:|||
Yeast  1228 KTY-NWN--LNLNTQGSIKLQGS--FNPEYIKPS---------------FDIVKGGITDKPMKIA 1272

  Fly   369  368
            Yeast  1273  1272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 22/126 (17%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 33/142 (23%)
C2B_Synaptotagmin-1 326..461 CDD:176047 10/45 (22%)
TCB3NP_013639.1 COG5038 44..1335 CDD:227371 76/390 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 1 1.000 - - otm46764
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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