DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and SYT15

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_024303996.1 Gene:SYT15 / 83849 HGNCID:17167 Length:474 Species:Homo sapiens


Alignment Length:297 Identity:105/297 - (35%)
Similarity:161/297 - (54%) Gaps:12/297 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 VQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYV 232
            :.|::.:..|:..|.|..|    ..||||.|.:||:..:..|.|.:|:|:.|.|  ...|..|.|
Human   180 INPELYKFPEDKSETDFPD----GCLGRLWFSVEYEQEAERLLVGLIKAQHLQA--PSETCSPLV 238

  Fly   233 KVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKV 297
            |:|||||:::..::|..|||.:|.|:|.|.|: :.......:.|.|:::..||..||..:|:|..
Human   239 KLYLLPDERRFLQSKTKRKTSNPQFDEHFIFQ-VSSKTITQRVLKFSVYHVDRQRKHQLLGQVLF 302

  Fly   298 PLCTIDLAQTIEE--WRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGL 360
            ||....|......  ||||.:...|...| .||:.|.|.|.....:||||:|.||.|:..:..|:
Human   303 PLKNETLVGDCRRVIWRDLEAESLEPPSE-FGDLQFCLSYNDYLSRLTVVVLRAKGLRLQEDRGI 366

  Fly   361 SDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEP 425
            ...:||:::|.:.|.:|.||||....::||.|||:|||:....::....|.:|||.......|:.
Human   367 VSVFVKVSLMNHNKFVKCKKTSAVLGSINPVYNETFSFKADATELDTASLSLTVVQNMEGDKSQQ 431

  Fly   426 IGRCILG-CMGT-GTELRHWSDMLASPRRPIAQWHTL 460
            :||.::| .|.| |.||.||.:||:.|:..:.:||.|
Human   432 LGRVVVGPYMYTRGRELEHWDEMLSKPKELVKRWHAL 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 46/125 (37%)
C2B_Synaptotagmin-1 326..461 CDD:176047 52/137 (38%)
SYT15XP_024303996.1 C2A_Synaptotagmin-15-17 202..322 CDD:176036 44/122 (36%)
C2B_Synaptotagmin-15 332..469 CDD:176054 52/137 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.