DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and AT3G03680

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_187018.1 Gene:AT3G03680 / 821190 AraportID:AT3G03680 Length:1017 Species:Arabidopsis thaliana


Alignment Length:572 Identity:125/572 - (21%)
Similarity:199/572 - (34%) Gaps:187/572 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPNAKSETDAKPEAEPAPASEPAADLESVDQKLEETHHSKF---REVDRQEQEVLAEKAAEAASQ 63
            ||.|.:.|:.||||..|...:|....::.|.| :||..:|.   :|.|::|:|...|:|.....:
plant   137 PPAAPAATEPKPEAAAATEEKPPEIAKAEDGK-KETEAAKTEEKKEGDKKEEEKPKEEAKPDEKK 200

  Fly    64 RIAQVESTTRSATTEAQESTTTA----VPVIKKIEHV--------GEVVT--EVIAERTGLPT-- 112
            ..|..::..:...|........|    .|:.:|.|.|        .|.|.  ::|.....||:  
plant   201 PDAPPDTKAKKPDTAVAPPPPPAEVKNPPIPQKAETVKQNELGIKPENVNRQDLIGSDLELPSLT 265

  Fly   113 ------WGVVAIIILVFLVVFGIIFFCVRRFLKKRRTK-DGK---------GKKGVDMKSVQLLG 161
                  .|...:..:.||.:         |..|.:|.| ||.         |..||..:|  ..|
plant   266 RDQNRGGGYDLVDRMPFLYI---------RVAKAKRAKNDGSNPVYAKLVIGTNGVKTRS--QTG 319

  Fly   162 SAYKEKVQPDMEELTENA--------EEGDEEDK---QSEQKLGRLNFKLE-------------- 201
            ..:.:....:.|.|...:        |:.::|||   .:|..||.::|.|:              
plant   320 KDWDQVFAFEKESLNSTSLEVSVWSEEKIEKEDKTTTTTESCLGTVSFDLQEVPKRVPPDSPLAP 384

  Fly   202 --YDFNSNS-----------------------------------------------LAVTVIQAE 217
              |...|..                                               |.:||||.:
plant   385 QWYTLESEKSPGNDVMLAVWLGTQADEAFQEAWQSDSGGLIPETRSKVYLSPKLWYLRLTVIQTQ 449

  Fly   218 ELPALDMGG-------TSDPYVKVYLLPDKKKKFETKVHRKTLS-----PVFNETFTF-KSLPYA 269
            :| .|.:|.       |::.|||..|.|...|...|.:.....|     |.:||...| .|.|:.
plant   450 DL-QLGLGSEAKSKIPTTELYVKAQLGPQVFKTARTSIGPSASSSGSGNPTWNEDLVFVASEPFE 513

  Fly   270 DAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTI-----DLAQTIEEWRDL-------------VS 316
            .       |.|...:..:....||:.|:.:.::     |..:....|.:|             |.
plant   514 P-------FLIVTVEDITNGQSIGQTKIHMGSVERRNDDRTEPKSRWFNLAGDEKKPYSGRIHVK 571

  Fly   317 VEGEGGQEKL-------GDICFSLRYV--PTAGKLTVVILEAKNL---KKMD-VGGLSDPYVKIA 368
            |..|||...|       .|:..|.:.:  |..|.|.|.|..|.||   |..| ..|.:|.||   
plant   572 VCLEGGYHVLDEAAHVTSDVRPSAKQLAKPPIGLLEVGIRGATNLLPVKTRDGTRGTTDAYV--- 633

  Fly   369 IMQNGKRLKKKKTSIKKCTLNPYYNESFSFEV--PFEQIQKICLVVTVVDYD 418
            :.:.|.:..:.:|.:.:  .||.:||.::::|  |       |.|:|:..:|
plant   634 VAKYGPKWIRTRTILDR--FNPRWNEQYTWDVYDP-------CTVLTIGVFD 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 25/130 (19%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 37/217 (17%)
C2B_Synaptotagmin-1 326..461 CDD:176047 29/108 (27%)
AT3G03680NP_187018.1 C2 8..134 CDD:472691
C2B_MCTP_PRT_plant 282..407 CDD:176024 26/135 (19%)
C2C_MCTP_PRT_plant 440..593 CDD:175986 38/160 (24%)
C2D_MCTP_PRT_plant 605..733 CDD:176025 24/84 (29%)
PRT_C 861..1017 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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