DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt11b

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001156003.1 Gene:syt11b / 794707 ZFINID:ZDB-GENE-090601-7 Length:456 Species:Danio rerio


Alignment Length:284 Identity:118/284 - (41%)
Similarity:178/284 - (62%) Gaps:24/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 EQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALD-MGGTSDPYVKVYLLPDKKKKFETKVHRKTL 253
            |...|.|:..::|:|...:|.||:::|..|||:: ..|::|||||:.:||:||.:.:|:|.||||
Zfish   183 EPSRGDLSIAIDYNFPKKALVVTILEARGLPAVEGQTGSADPYVKMTILPEKKHRVKTRVLRKTL 247

  Fly   254 SPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTID-------LAQTIEEW 311
            .|.|:|||||..:||:...:.||.|.:..|||||:.|.|||..|||..:|       :.|.|.: 
Zfish   248 EPAFDETFTFYGVPYSSLSDLTLHFLVLSFDRFSRDDVIGEAMVPLAGVDPSTGRVHITQQITK- 311

  Fly   312 RDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLS-DPYVKIAIMQNGKR 375
            |::..|..       |::..||.|.|.:.:|:||:|:||:|.|:|:.||| :||||:.:....||
Zfish   312 RNMQCVSH-------GELLVSLSYQPVSHRLSVVVLKAKHLPKLDITGLSANPYVKLNVFYGHKR 369

  Fly   376 LKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILG----CMGT 436
            :.||||.:|||||||.:||||.::||.|.:..|.:...|:|:||...::.:||.:||    |...
Zfish   370 IAKKKTHVKKCTLNPVFNESFIYDVPAELLPDISIEFLVMDFDRTTKNQALGRLVLGADSPCPSG 434

  Fly   437 GTELRHWSDMLASPRRPIAQWHTL 460
            ..   ||.::..:|||.|::||||
Zfish   435 AA---HWQEVCQNPRRQISKWHTL 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 55/131 (42%)
C2B_Synaptotagmin-1 326..461 CDD:176047 61/140 (44%)
syt11bNP_001156003.1 C2 186..309 CDD:472691 53/122 (43%)
C2B_Synaptotagmin-4 320..456 CDD:176049 61/139 (44%)
Blue background indicates that the domain is not in the aligned region.

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