DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and sytl1

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001122005.1 Gene:sytl1 / 777759 ZFINID:ZDB-GENE-060503-439 Length:539 Species:Danio rerio


Alignment Length:391 Identity:97/391 - (24%)
Similarity:168/391 - (42%) Gaps:95/391 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KSVQLLGSAYKEKVQPDMEELTENAE---------------EGDEEDKQSEQKL----------- 193
            |..::|||.:::.|     |.:||.|               |||.:...:|...           
Zfish   160 KRNEILGSGFEDSV-----EESENKERRILPSTSPTLQIDSEGDIDSGSTEINYTRFGSVTSLTS 219

  Fly   194 -----------------------GRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVY 235
                                   ||:.|.|:||..:..|.|.:|:.::| |......||||||||
Zfish   220 HHMMNGSLMSLYSVGDFGDVVVSGRIQFSLQYDVRTEELYVHIIRCQDL-ASARKNRSDPYVKVY 283

  Fly   236 LLPD--KKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVP 298
            ||||  .:.|.:|.|.||||:||::||.|:| :...|...:.|..:::..:|..::..:||::|.
Zfish   284 LLPDNTSRSKKKTAVRRKTLNPVYDETMTYK-VRRLDLPARVLSMSVWHMERMRRNLFLGELEVR 347

  Fly   299 LCTIDLAQTIEEWRDL---VSVEGEGGQEKLGDICFSLRYV---------PTAGKLTVVILEAKN 351
            |...|.:|....|::|   |.:..|....: |.|.||:::|         |..|:|.:.:.|...
Zfish   348 LGQWDWSQNQPTWQNLQPRVQLSPEAIISR-GTILFSIKFVPPGSEGRGNPATGELHIWLREIVG 411

  Fly   352 L---KKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKI--CLV 411
            |   |:    |..:.|||..::.:...:..::|.:.:.:::|.:|.:..:: .|:....|  |..
Zfish   412 LLPTKR----GAPNTYVKSVVLPDESGVSGQQTRVVRGSVSPVFNHTMVYD-GFQSSDLIQACAE 471

  Fly   412 VTV--------VDYDRIGTSEPI--GRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEET 466
            :||        :...|:.|...:  |:.:.....|..|:..||.::.||.    .|.....|..|
Zfish   472 ITVWNPHPSGCLGGVRLSTGSGLSYGQSVCWMDSTEDEINVWSSVIQSPN----SWVDTSLPIRT 532

  Fly   467 D 467
            :
Zfish   533 N 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 47/162 (29%)
C2B_Synaptotagmin-1 326..461 CDD:176047 33/158 (21%)
sytl1NP_001122005.1 PHD_SF 12..>43 CDD:304600
C2A_SLP-1_2 242..364 CDD:176039 46/123 (37%)
C2B_SLP_1-2-3-4 377..531 CDD:175987 34/163 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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