DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and SYT4

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_065834.1 Gene:SYT4 / 6860 HGNCID:11512 Length:425 Species:Homo sapiens


Alignment Length:435 Identity:151/435 - (34%)
Similarity:218/435 - (50%) Gaps:73/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 PVIKKIEHVGEVVTEVIAERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTK-------- 144
            |:....|...|:.|.|          |:.:...|||.|.......|.|:..|..:|.        
Human     3 PITTSREEFDEIPTVV----------GIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVL 57

  Fly   145 ----------DGKGKKG-------------------VDMKSVQLLGSAYKEKVQPDMEELTENAE 180
                      :.|.|.|                   :|::...|.|:..|..::|......|||.
Human    58 KGVDIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLNGNFPKTNLKPGSPSDLENAT 122

  Fly   181 -----EGDEE--------------DKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALD-MG 225
                 ||::|              .::.::|||.|.|.|||:|...:..|.:.:|..|||:| ..
Human   123 PKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQS 187

  Fly   226 GTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHD 290
            .|||||:|:.:||:||.|.:|:|.||||.|.|:|||||..:||.......|.|.|..|||||:.|
Human   188 MTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDD 252

  Fly   291 QIGEVKVPLCTIDLAQ-TIEEWRDLV--SVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNL 352
            .||||.:||..|:|:: .:...|:::  :|....|:   |::..||.|..|...||||:|:|::|
Human   253 IIGEVLIPLSGIELSEGKMLMNREIIKRNVRKSSGR---GELLISLCYQSTTNTLTVVVLKARHL 314

  Fly   353 KKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDY 417
            .|.||.||||||||:.:....||:.||||.:||||.|..:||.|.|::|.|.::.|.:...|:|.
Human   315 PKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVLDS 379

  Fly   418 DRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKD 462
            :|...:|.||:.:||....||...||.::...|||.||:||.|.|
Human   380 ERGSRNEVIGQLVLGAAAEGTGGEHWKEICDYPRRQIAKWHVLCD 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 19/109 (17%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 59/127 (46%)
C2B_Synaptotagmin-1 326..461 CDD:176047 60/134 (45%)
SYT4NP_065834.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93 1/19 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..147 3/19 (16%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 59/125 (47%)
C2B_Synaptotagmin-4 288..423 CDD:176049 60/137 (44%)

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