DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Syt9

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_038944965.1 Gene:Syt9 / 60564 RGDID:621169 Length:566 Species:Rattus norvegicus


Alignment Length:306 Identity:145/306 - (47%)
Similarity:206/306 - (67%) Gaps:12/306 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 QLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPAL 222
            ||.|..   :::|::.:  :.:.:.|:..:.:.:..|:|||.|:||.:...|.|.:.:|..|||.
  Rat   191 QLTGIG---RIKPELYK--QRSLDNDDGRRSNSKACGKLNFILKYDCDLEQLIVKIHKAVNLPAK 250

  Fly   223 DMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFS 287
            |..||||||||:|||||:|.|.:||||||||:|||:|.|.| .:.|.|...:.|.|:::||||||
  Rat   251 DFSGTSDPYVKIYLLPDRKTKHQTKVHRKTLNPVFDEVFLF-PVHYNDLEARKLHFSVYDFDRFS 314

  Fly   288 KHDQIGEVKVPLCTIDLAQTIEE---WRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEA 349
            :||.||:|.|. ...|||....|   |:|:..|..:  ...||::.|||.|:||||:||:.|::|
  Rat   315 RHDLIGQVVVD-HFFDLADFPRECILWKDIEYVTND--NVDLGELMFSLCYLPTAGRLTITIIKA 376

  Fly   350 KNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTV 414
            :|||.||:.|.||||||:::|.:|:||||:|||.|:.||||.|||:..|:||.|.|.:|.|.:.|
  Rat   377 RNLKAMDITGASDPYVKVSLMCDGRRLKKRKTSTKRNTLNPVYNEAIVFDVPPESIDQIHLSIAV 441

  Fly   415 VDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTL 460
            :||||:|.:|.||.|.:|.........|||:||:.||:|||.||:|
  Rat   442 MDYDRVGHNEVIGVCQVGNEAERLGRDHWSEMLSYPRKPIAHWHSL 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 65/126 (52%)
C2B_Synaptotagmin-1 326..461 CDD:176047 74/135 (55%)
Syt9XP_038944965.1 C2 221..345 CDD:417471 65/125 (52%)
C2B_Synaptotagmin-3-5-6-9-10 354..487 CDD:176048 72/132 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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