DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt2a

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_696277.2 Gene:syt2a / 567877 ZFINID:ZDB-GENE-060503-315 Length:430 Species:Danio rerio


Alignment Length:425 Identity:230/425 - (54%)
Similarity:304/425 - (71%) Gaps:12/425 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VLAEKAAEAASQRIAQVESTTR--SATTEAQESTTTAVPVIKKIEHVGEVVTEVIAE--RTGLPT 112
            ||.:|.|...........:.|.  :.:|.|..||....||.|. :..|::..:.:.|  :..||.
Zfish     5 VLKKKPAAMVGPEPTGASALTMAPAVSTPADNSTEHQGPVSKN-DVFGDIKNKFLNEMDKLPLPP 68

  Fly   113 WGVVAIIILVFLVVFGIIFFCVRR-FLKKRRTKDG-KGKKGVDMKSVQLLGSAYKEKVQPDMEEL 175
            |.::||.|:..:::....|..|:: .|||::.|.| |||..:.||:::   ...|::...|.|::
Zfish    69 WAIIAIAIVAVVLILTCCFCIVKKTCLKKKKGKKGKKGKGDMGMKNMK---GGEKQEEDDDEEDI 130

  Fly   176 TENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDK 240
            .....|..||:.:.::|||:|.|.|:|||:::.|.|.::||.:|.::|.||||||||||::||||
Zfish   131 DMGITEEKEEEPKEKEKLGKLQFSLDYDFSASQLTVGILQAADLLSMDSGGTSDPYVKVFILPDK 195

  Fly   241 KKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLA 305
            |||::||||:|||:|||||||.|| :|:.:...||||.:::|||||||||.|||||:|:.|:|||
Zfish   196 KKKYDTKVHKKTLNPVFNETFHFK-IPFTEMGGKTLVMSVYDFDRFSKHDVIGEVKIPMNTLDLA 259

  Fly   306 QTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIM 370
            |.||:||||.|.|.| ..|||||||.||||||||||||:.||||||||||||||||||||||.::
Zfish   260 QPIEQWRDLDSAEKE-EPEKLGDICISLRYVPTAGKLTICILEAKNLKKMDVGGLSDPYVKIHLL 323

  Fly   371 QNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMG 435
            |||||||||||::||.|||||||||||||:|.:|:|||..|:||:|||:||.::.||:..:|...
Zfish   324 QNGKRLKKKKTTVKKNTLNPYYNESFSFEIPQDQMQKIQAVITVLDYDKIGKNDAIGKIWVGSKA 388

  Fly   436 TGTELRHWSDMLASPRRPIAQWHTLKDPEETDEIL 470
            .||||||||||||:|||||||||.||..||.|..|
Zfish   389 QGTELRHWSDMLANPRRPIAQWHPLKPEEEVDATL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 28/104 (27%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 79/123 (64%)
C2B_Synaptotagmin-1 326..461 CDD:176047 102/134 (76%)
syt2aXP_696277.2 Syt2_N 5..>94 CDD:409249 22/89 (25%)
C2A_Synaptotagmin-1-5-6-9-10 148..270 CDD:176031 78/122 (64%)
C2B_Synaptotagmin-1 279..414 CDD:176047 102/134 (76%)

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