DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and si:ch211-266g18.6

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_005169912.1 Gene:si:ch211-266g18.6 / 565707 ZFINID:ZDB-GENE-131121-599 Length:1009 Species:Danio rerio


Alignment Length:513 Identity:113/513 - (22%)
Similarity:198/513 - (38%) Gaps:132/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KPEAEPAPASEPAADLESVDQKLEETHHSKFREVDRQE--QEVLAEKAAEAASQRIAQVES-TTR 73
            |...||...:.|:.|:....|...|..    .:||..|  .:||....|.|...|...::: |.:
Zfish   534 KSVPEPIKPAHPSDDVAGFGQDSSEIK----VDVDSAETKSDVLLNVLARAQKTRPPVLQNITNQ 594

  Fly    74 SATTEAQESTTTAV---------PVIKKIEHVGEVVTEVIAER---------------------- 107
            ....|..:.|..::         |...|....|.:|.|.:.:.                      
Zfish   595 EPNLEGTDDTVPSIVIVPSESPDPAEMKGNKRGALVLEALLQSSTAKNPSYIADAWEDEGVNSDD 659

  Fly   108 --TGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGVDMKSVQL------LGSAY 164
              |.|.::|                             .|...:||....::.|      |.|.|
Zfish   660 DDTSLSSYG-----------------------------SDLSSRKGFSASALSLTDRTGSLLSVY 695

  Fly   165 KEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELP-ALDMGGTS 228
                             .|..|..:.:..|.:.|.:.|. ....|.:.:.|.::|. |......:
Zfish   696 -----------------SDAGDFGTVEVQGSVEFAVMYS-PVGELIIMIEQCQDLAIANPRKQRT 742

  Fly   229 DPYVKVYLLPDK--KKKFETKVHRKTLSPVFNETFTFK----SLPYADAMNKTLVFAIFDFDRFS 287
            |||||.||.|||  :.|.:|.:.::|::|||.|:..:|    .||     .|:|..:::..|...
Zfish   743 DPYVKTYLYPDKSRRSKRKTTIKKRTVNPVFVESLRYKVNREELP-----EKSLNLSVWHNDSRG 802

  Fly   288 KHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQ--EKLGDICFSLRYVPTA---------GK 341
            ::..:|:|::...|.|.......|.:|.....|..:  |..|.:..||:|||:|         |:
Zfish   803 RNVFLGQVELSFRTWDWGHEALTWYNLQPKTSENAETKESNGLLSVSLKYVPSASTGGSKSSTGE 867

  Fly   342 LTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFE--Q 404
            :.|.:.|||.|:::...|: |.:||..|:.:.::..::||.:.|.|.:|.||.:..:: .|:  :
Zfish   868 IHVWLREAKELRRLKPQGV-DSFVKCYILPDTRKKSRQKTRVVKKTQDPVYNHAMVYD-GFKTGE 930

  Fly   405 IQKICLVVTVVDYD------------RIGTSEPIGRCILGCMGTGTELRHWSDMLASP 450
            :.:.|..:||.|::            .:||.:..|:.:........|::.|..|||||
Zfish   931 VTEACCELTVWDHNTLANQFLGGVRLSLGTGQSYGKKVDWMDSVDEEVQIWKRMLASP 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 16/138 (12%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 36/130 (28%)
C2B_Synaptotagmin-1 326..461 CDD:176047 40/148 (27%)
si:ch211-266g18.6XP_005169912.1 C2A_SLP-1_2 707..830 CDD:176039 35/128 (27%)
C2B_SLP_1-2-3-4 843..999 CDD:175987 40/148 (27%)

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