DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt14a

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_017214324.1 Gene:syt14a / 564702 ZFINID:ZDB-GENE-090313-200 Length:687 Species:Danio rerio


Alignment Length:371 Identity:93/371 - (25%)
Similarity:158/371 - (42%) Gaps:60/371 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GKKGVDMKSVQ----LLGSAYKEKVQPDM------EELTEN---AEEGDEEDKQSEQKLGRLNFK 199
            ||...::...|    .|...|:|.|..|.      |:|:..   |:.....|.:...:.|.|:..
Zfish   316 GKCPSELSGAQETESFLNKGYEEDVPSDSTAVLSPEDLSARGSAAQLPKGYDPEPLAQYGTLDVV 380

  Fly   200 LEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFK 264
            .:||.:...|::::....::|:|...|.....|.:.|||.||::.:|.:.|.. .|||.|||.|.
Zfish   381 FDYDSSDQRLSISITALTDIPSLKRTGNISWQVHLVLLPTKKQRAKTIIQRGP-CPVFTETFHFS 444

  Fly   265 SLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKV-------------------PLCTIDLAQTIEE 310
            .:......|..:.|.::...|..|...:|| ||                   |.|.|..:.:...
Zfish   445 HIESEMIGNYAIRFRLYSVRRMKKEKALGE-KVFYLTKLNLQGKMSVPIILDPYCNIPGSDSQAS 508

  Fly   311 WRDL-----VSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMD-------------- 356
            ..|:     .|......|....:|...|.|..|.|:|:|.:::..:.|.:.              
Zfish   509 MSDVSCSETASSYPSAAQGSAPEILLGLVYNATTGRLSVEVIKGSHFKNLAANKPPNGLFCCLKH 573

  Fly   357 -VGG----LSDPYVKIAIMQN-GKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVV 415
             :||    :.|.|||:.::.: |:.:.|.|||:.:...||.|.|:|.|:|...|:..:.|:::|.
Zfish   574 LIGGQVYIIRDTYVKLTLLNSMGQEMSKCKTSVCRGQPNPTYKETFVFQVALFQLSDVTLILSVY 638

  Fly   416 DYDRIGTSEPIGRCILGCMGTG-TELRHWSDMLASPRRPIAQWHTL 460
            :...:...|.||...||...:| .||.||::|..|..:.:.:||:|
Zfish   639 NKRSMKRKEMIGWISLGLNSSGEEELTHWTEMKESKGQQVCRWHSL 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 35/147 (24%)
C2B_Synaptotagmin-1 326..461 CDD:176047 44/156 (28%)
syt14aXP_017214324.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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