DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and syt6b

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_068080445.2 Gene:syt6b / 562928 ZFINID:ZDB-GENE-090601-3 Length:543 Species:Danio rerio


Alignment Length:325 Identity:146/325 - (44%)
Similarity:229/325 - (70%) Gaps:8/325 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 KGKKGVDMKSVQLLGSAYKEKVQPDM-EELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLA 210
            :|.:.:|::......:|...::||:: ::.|..||:..:.|  :::..|::||.|:||:....|.
Zfish   200 RGSEFLDVEDHPSCTAASLGRIQPELYKQSTMEAEDSSKND--TDKSCGKINFSLKYDYEGELLL 262

  Fly   211 VTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKT 275
            ||:::|.:|||.|:.|:||||||:|||||:|:||:|:||||||:|.|:|||.| .:||.:..::.
Zfish   263 VTILKAFDLPAKDLCGSSDPYVKIYLLPDRKRKFQTRVHRKTLNPTFDETFQF-PVPYEELGSRK 326

  Fly   276 LVFAIFDFDRFSKHDQIGEVKVP-LCTI-DLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPT 338
            |..::|||||||:||.||||.:. |..: ||::....|:|:.....|  ...||:|.|||.|:||
Zfish   327 LHLSVFDFDRFSRHDMIGEVILENLFEVSDLSRETSIWKDIQYATSE--SVDLGEIMFSLCYLPT 389

  Fly   339 AGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFE 403
            ||:||:.:::.:|||.||:.|.||||||::::.:|:|||||||||||.||||.|||:..|::|.|
Zfish   390 AGRLTLTVIKCRNLKAMDITGYSDPYVKVSLICDGRRLKKKKTSIKKNTLNPTYNEAIIFDIPPE 454

  Fly   404 QIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEETDE 468
            .:.::.|.::|:|||.:|.:|.||.|.:|....|....||::|||.||:|||.||.|.:|:::::
Zfish   455 NMDQVSLHISVMDYDLVGHNEIIGVCRVGIHAEGLGRDHWNEMLAYPRKPIAHWHPLVEPKKSEK 519

  Fly   469  468
            Zfish   520  519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 2/13 (15%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 63/125 (50%)
C2B_Synaptotagmin-1 326..461 CDD:176047 71/134 (53%)
syt6bXP_068080445.2 None

Return to query results.
Submit another query.