DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt8

DIOPT Version :9

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_006508695.1 Gene:Syt8 / 55925 MGIID:1859867 Length:402 Species:Mus musculus


Alignment Length:393 Identity:161/393 - (40%)
Similarity:226/393 - (57%) Gaps:35/393 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 TAVPVIKKIEHVGEVVTEV-IAERTGL-PTWGV-VAI----IILVFLVVFGIIFFCVRRFLKKRR 142
            ||.|.:     :.:::|.: .|...|| |.|.: :||    ::||..::..|..:|.|.    |.
Mouse    25 TAGPSL-----IPDLITRIPSACAPGLGPRWTLFIAILAAGVLLVSCLLCVICCYCHRH----RH 80

  Fly   143 TKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSN 207
            .|..|.|:.|.:.|.:  .|.....||||::.| |....||       |:.|||...|||||.|.
Mouse    81 RKQPKDKETVGLGSAR--NSTTTHLVQPDVDCL-EPCSGGD-------QQWGRLLLSLEYDFGSQ 135

  Fly   208 SLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAM 272
            .:.|.:.||..|.|   .||:|||..|.:.....::.||||||.||||:|.||..| .:|.|:..
Mouse   136 EIRVGLRQAGNLKA---EGTADPYAWVSVSTQSGRRHETKVHRGTLSPMFEETCCF-LVPPAELP 196

  Fly   273 NKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVP 337
            ..||...::||.|||:|:.:||:::||.|:||...:|.|..| ...|....|::|::||||||||
Mouse   197 KATLKVQLWDFKRFSEHEPLGELQLPLGTVDLQHVLESWYQL-GPPGTTEPEQMGELCFSLRYVP 260

  Fly   338 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPF 402
            ::|.||||:|||:.|..    ||::.||||.:|.|.::.||.|||.||.|..||:||:|.|.||.
Mouse   261 SSGSLTVVVLEARGLNP----GLAEAYVKIQLMLNQRKWKKSKTSSKKGTTTPYFNEAFVFLVPV 321

  Fly   403 EQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTLKDPEETD 467
            .|:|.:.||:.|........:||:|:.:||...:|..|:||:||||..||||||||.|:.|.|.|
Mouse   322 SQLQSVDLVLAVWARGLQLRTEPVGKVLLGSRASGQPLQHWADMLAHARRPIAQWHHLRSPREVD 386

  Fly   468 EIL 470
            .:|
Mouse   387 RVL 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 15/57 (26%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 54/123 (44%)
C2B_Synaptotagmin-1 326..461 CDD:176047 68/134 (51%)
Syt8XP_006508695.1 C2 122..240 CDD:417471 54/122 (44%)
C2 249..379 CDD:417471 68/133 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

Return to query results.
Submit another query.